Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00437 ATGGGCGAGGGTAGCAGCAACAACAGCAACAGCAGAGGTGTTGCGGGCAGTAGTAACAACACCACCACCACAAACACCAACAGCAACAGGCCAGCGTGGTTGCAACAGTACGACCTGATCGGTAAGATCGGGGAGGGCACATACGGCCTCGTCTTCCTCGCCAGGATAAAGTCTTCACCCAACCGTGGCAAATGCATCGCCATCAAGAAATTCAAGCAGTCCAAAGATGGCGATGGTGTCTCCCCCACCGCCATCCGTGAAATCATGTTACTTCGGGAAATTAACCACGAGAATGTTATTAAACTCGTGAATGTACACATTAATCATGCCGATATGTCACTTTATCTGGCGTTCGACTACGCCGAGCATGATCTTTATGAAATTATAAGACATCACAGAGAAAAAGTCAGCCAAGCTATTAATCAGTACACAATTAAGTCACTGCTCTGGCAGCTGCTCAATGGGTTGAACTATCTCCATTGTAATTGGATTATACATCGAGATCTGAAGCCGTCCAACATCCTGGTTATGGGTGAGGGAGAAGAACAAGGAGTTGTAAAAATTGCTGATTTTGGACTTGCTAGAATATACCAAGCTCCCTTGAAGCCTTTATTTGAAAATGGGGTTGTGGTAACTATTTGGTATCGTGCACCTGAGTTGCTTCTCGGGGCCAAGCATTATACGAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTACTCACTTTAAAGCCTCTATTTCAAGGAGTGGAAGTCAAAGCTACACCAAACCCTTTTCAGCTTGATCAGCTTGACAAGATATTTAAGGTCTTAGGCCATCCAACACAAGAAAAGTGGCCAACACTTTTGAATCTTCCACATTGGCAATCAGATCAACAACATATCCAGGGGCATAAATACGACAATCCTGGTCTTTATAGTGTTGTTCATCTCCCTCAGAAAAGTCCTGCATATGACCTACTCTCAAAGATGCTCGAATACGATCCTCGTAAGCGTATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCCGGATTGATCCTCTTCCAGGGCGCAATGCTCTGGTACCTTGTCAACCGGGGGAGAAAGTTGTGAATTATCCTGCTCGTCCAGTGGACACAACTACAGATTTTGAGGGAACAAATAGCGTCCAACCTTCTCAACAGGTATCATCAGGAAATGCAGTTCCTGGGAGTGGGGTGGCTGCCTCTGCGGTGACAGCTAGACCTGTCCCTCGGCCAATGCCTCCTATGGTTGGCATGCAGAGGATGCCTGGTCAAGGCATGACAGCTTTCAATCTCGCTTCTCAGGCCAGCATGGGTGGTGGAATGAATCCTGGCGGCCTCCCGATGCAACGGGGTGCTGCTGCTGCTGCTGCCCAGGCCCATCAGCAGCAACAGTTGAGAAGAAAAGATCCAGGAATGGGGATGACTGGATACCCTCCGCCGCCGAAATCAAGACGTTTTTAA 1479 0.4767 MGEGSSNNSNSRGVAGSSNNTTTTNTNSNRPAWLQQYDLIGKIGEGTYGLVFLARIKSSPNRGKCIAIKKFKQSKDGDGVSPTAIREIMLLREINHENVIKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKVSQAINQYTIKSLLWQLLNGLNYLHCNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKPLFENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKIFKVLGHPTQEKWPTLLNLPHWQSDQQHIQGHKYDNPGLYSVVHLPQKSPAYDLLSKMLEYDPRKRITAAQALEHEYFRIDPLPGRNALVPCQPGEKVVNYPARPVDTTTDFEGTNSVQPSQQVSSGNAVPGSGVAASAVTARPVPRPMPPMVGMQRMPGQGMTAFNLASQASMGGGMNPGGLPMQRGAAAAAAQAHQQQQLRRKDPGMGMTGYPPPPKSRRF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00437 492 SMART serkin_6 37 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00437 492 SUPERFAMILY Protein kinase-like (PK-like) 32 348 IPR011009 -
Eupl03g00437 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Eupl03g00437 492 MobiDBLite consensus disorder prediction 382 401 - -
Eupl03g00437 492 MobiDBLite consensus disorder prediction 443 492 - -
Eupl03g00437 492 Pfam Protein kinase domain 37 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00437 492 PANTHER CELL DIVISION PROTEIN KINASE 35 353 - -
Eupl03g00437 492 FunFam Putative cyclin-dependent kinase E-1 121 360 - -
Eupl03g00437 492 ProSiteProfiles Protein kinase domain profile. 37 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00437 492 MobiDBLite consensus disorder prediction 1 29 - -
Eupl03g00437 492 Gene3D Phosphorylase Kinase; domain 1 20 120 - -
Eupl03g00437 492 ProSitePatterns Protein kinases ATP-binding region signature. 43 70 IPR017441 GO:0005524
Eupl03g00437 492 FunFam Cyclin-dependent kinase e-1 25 120 - -
Eupl03g00437 492 Gene3D Transferase(Phosphotransferase) domain 1 121 359 - -
Eupl03g00437 492 CDD STKc_CDK8_like 36 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00437 Eupl-Chr3 19215373 19246780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00437 1 492 Core Cell Cycle Gene Families AT5G63610 73.279 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Eupl03g00437 Pkinase 8.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00437 K02208 - ming:122069339 805.823