Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00432 ATGAAGGATGATCAAAGGAATTCAAGTTTGTTCATTCGACAAGAGAAGTTGGTAATGGTGCAACCTGGTGTTGATGAAGGGTTGGCTGTAAAGAAACAAAATAACAATACCAAAGAGAGAGTACGTAGGATGAAACGCATTCAAGCCGCAAAGTTGGTTCAATTCCATGCTGATGAAGGATCAATAGTGAAGAAACTTAATCATAATGCTAAGGAGAGAGTGCGTAGGTTGAAACTCAATGCCTCCTACTTGGCCCTTCGTTCATTGCTACCCGCCAATTCTCGTAGATCAAAGAATAAAGCGAGTGCTCCTGCAATAGTCTCTAGAGTTCTAGAATACATTCCAGAGTTGGAGAATGAGATAGAGAAGCTAAATCAAAAGAAGGACCACATTTTATCAGTCATAGAAGAGAAGCATGTCTCCTCCCAAAATCCACCTTTGCAATCCCAAACTCCAATGATTTTGGTTAGTGAAGTTAATGAAGCTGAAGTGATTGTCCAGATATGCATGCATAGAAAAGAAGCTCATGTTTTCTCAAATCTACTAAGTAAAGTTGAAGGAGAAGGCATGTGCATTTCCAGTACATCGACTCTTTCGGTCTCTGATGATAGAGTCTGTTGTCATCTACATCTACATATGAATGGAAGTTCTTCAAAATCTGATTACATCGCAGTTTTGAAGGATAAGATGGCATCCTGGTGTGTGTGA 708 0.3969 MKDDQRNSSLFIRQEKLVMVQPGVDEGLAVKKQNNNTKERVRRMKRIQAAKLVQFHADEGSIVKKLNHNAKERVRRLKLNASYLALRSLLPANSRRSKNKASAPAIVSRVLEYIPELENEIEKLNQKKDHILSVIEEKHVSSQNPPLQSQTPMILVSEVNEAEVIVQICMHRKEAHVFSNLLSKVEGEGMCISSTSTLSVSDDRVCCHLHLHMNGSSSKSDYIAVLKDKMASWCV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00432 235 Gene3D - 56 145 IPR036638 GO:0046983
Eupl03g00432 235 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 117 IPR011598 GO:0046983
Eupl03g00432 235 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 46 232 - -
Eupl03g00432 235 SMART finulus 69 123 IPR011598 GO:0046983
Eupl03g00432 235 Coils Coil 107 134 - -
Eupl03g00432 235 Pfam Helix-loop-helix DNA-binding domain 64 118 IPR011598 GO:0046983
Eupl03g00432 235 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 134 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00432 Eupl-Chr3 19082389 19083294 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00432 62 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 36.306 9.98e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl03g00432 HLH 3.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00432 - - nnu:104587533 264.233