Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00423 ATGAGCGATTCGAAGGTGGAGACAATTTCTCGACTCTCACAATGGAGGATCGAGAGCTTTGGTCCTTGCTCTTACAAACGATCCGATCCTTTCAAGGTCGGAATCTGGAACTGGCACTTATCGATCGAGAAGAATCGCTATCTCTACGTTCGTCTCTTTCCAGAGCCTTGTAGAGTCTCCAAAGACCAGCCTCCCATCGCTAGATTTGTCCTTCGTGTCTCCAATATTGGCGGCAATCGACGTCCGTACATCTCGCCCATTCATGAGAGACTGCTCCGAACCAGTGAAGACTTTGTCTGGCCTGTTGATTGCACCTTTCATGGTCGATTCATCATCGATGTCGAATTTCTGGACCTGAAGATCTGTCCACTAAGCGGTGGGGAAGCCAGTTCTATATGGCCTAGTGAAGGAACAATGCAATCTCTTGCATCCCAAAGCACTCTCCGATGCCTCTCACGCATGCTCGATGAGGAAATCCATGCTGATGTCACCATCAACACGGCTGATGGCAGTCTGAGAGCGCACAAGGCAATTCTATCCGCAAGCTCTCCTGTGTTCCAGAGCATGTTCCTGCACAACCTCAAGGAGAAAGAGTCCTCCACGATCGACATAGAGGACATGTCATTGGAGTCATGCATGGCCCTCCTCAGTTACTTGTATGGAACCATACAACAAAAGGATTTCTGGAAGCATCGGTTGTCACTTCTTGGCGCGGCAAACAAATATGACATCACAGACCTCAAAGACGCTTGTGAGGAAAGCCTCATGGAGGACATCAACTCAGGCAACGTCCTCGAGAGGTTGCAGGAGGCCTGGCTTTACCAGCTGAACAAGCTGAAGAGAGGGTGCTTGATGTACTTGTTCGATTTTGGTAAGATATATGATGTCAGAGACGAAGTCAATAACTTCTTCAGGCATGCAGATAGGGACCTTATGGTGGAGATGTTTCAGGAGGTGCTCACAGTCTGGAAGCCAGCATGA 981 0.4893 MSDSKVETISRLSQWRIESFGPCSYKRSDPFKVGIWNWHLSIEKNRYLYVRLFPEPCRVSKDQPPIARFVLRVSNIGGNRRPYISPIHERLLRTSEDFVWPVDCTFHGRFIIDVEFLDLKICPLSGGEASSIWPSEGTMQSLASQSTLRCLSRMLDEEIHADVTINTADGSLRAHKAILSASSPVFQSMFLHNLKEKESSTIDIEDMSLESCMALLSYLYGTIQQKDFWKHRLSLLGAANKYDITDLKDACEESLMEDINSGNVLERLQEAWLYQLNKLKRGCLMYLFDFGKIYDVRDEVNNFFRHADRDLMVEMFQEVLTVWKPA* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00423 326 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Eupl03g00423 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Eupl03g00423 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Eupl03g00423 326 PANTHER OS08G0495500 PROTEIN-RELATED 1 325 IPR044714 -
Eupl03g00423 326 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Eupl03g00423 326 SUPERFAMILY POZ domain 144 257 IPR011333 -
Eupl03g00423 326 SMART BTB_4 161 259 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00423 Eupl-Chr3 18756859 18761110 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl03g00423 BTB 8.5e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00423 K10523 - nnu:104587814 607.06