Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00391 ATGGATATTGAACCCCGCATGACTAAAGACATTATGGAGGAGACTTCCAAATCTAGGGATTGCATTGCAGTTGAAGATGTTGAACCTTGTGCTGGTATGAATGAAGTAGAAGAGAATTATGGCATGAGGGAGTGCACCGCAATTGAAGATGCAAATTTAGACCCCTATGTAGGTATGGAGTTCGAATCCGAACAAGCAACTTATTCATTCTACAATGAATATGCTAAGCGTGTAGGCTTTTGCATTCGTAAGAGATTCATTCGTCGTTCAAGAACGAACAATGAAGTCATCTGTAGAACATATGTGTGTTCGAGAGAAGGTTTAAAAAAGACCAAAAAAGAAGTAGATAAACCAAGACCCAACACAAGGTTAGATTGCAAGGCGATGATGAAGGTGAAGAGAGATGGGAATGGGAAGTGGGTGATGATACAGTTTATCAAGGAACATAACCATAAACTCAATCCAGAGAGTGTGTGCTTGTCCCGACCACGGAGAAAGATAAGTAGGGCTAAAAAAAATATCAGAACTTCGAAATCTTCAGGAATGCAGGTGTCCAAGATAATGTCCAGAGCAACCAAGCAATCTGGTGGAGTTAATAACGTACTTGCCACAGATAAAGACAACAGAAATTTTGTTGATAAAGAACGACAAGAGTTCCTATCAGCTGGAGATGCACAGATTATATATGAGTACTTCATGCGTACACAAGCTTCTAATCCTAGATTTTTTTATGCAATGCAATTAGATGAAGAACAACATTTAAGAAATGTTTTTTGGGCTGATACCAAGTCTAGAATGTCTTATGCTCACTTTGGTGATGTTATCACTTTTGACACTACATACTTGACAAAGAAGTATGAGATGAAGCTAGCGCTGTTTATAGGAGTTAACCACCATGGGCAATCTGTGTTGCTTGGATGTGCACTAATTACAGATGAGACGACAGCAGCTTTTATTTGGGTGTTTAAAACATGGCTTACAGCGATGCAAGGGAGGCCTCCCAAGGCCATAATTACTGACCAACACATGGCCATAAAAGATGCAATAGCAGAGGTATTTCCAGAAGCTCATCATCGTCTTTGCTTGTGGCATATTATGAAAAAAGTTCCTGAGAAATTGGGTAGTGTATGTAAAGCCAATGTCGGGTTCATGTCTAAATTTGATGAATGCATTTATGATTCGCTAACAGTTGATGAATTCGAAAAACGCTGGAAGAACTTGATTGAAGCTTATAAACTCACAGACCATGAATGGCTTCGAACAATGTATGAAGATCGATCACAATGGATCCCAGTGTACTTGAAGGACACTTTTTTTGCAGGCATGTCCACTTCCCAGAGAAGTGAAAGTATAAACTCTTTTTTTGATGATTATGTTAGTCAAAAGACCAGCTTGAAGGAGTTCATAGATAAATATGAATTAGCTTTACTAAGAAGGTATAATGATGAAGAGAAAGCAGATCTTGAAACATACCATAAAACACCAGATTTGAAAACAGGATCACCTTTTGAAGCCCAAATGGCATCTATATACACGATGGATATATTTAAGAAATTCCAAGATGAAGTTCTACATATTCCCTCGTGTAATGCAGTACATATTGCGCAAGAAGAAGGGGCAAATGCAACTTATGTAGTGAAGGAATTGATCATGAAGCCAAATGGTCAAAGGGTTACACGAGACTACACAGTTTTGTGGAGTGGCTCTGAAACCACAATTTCTTGTATCTGTCGGTTGTTTCAATTCAAAGGTTATCTGTGTAGACATGCAATGGTAGTCCTTTTTGCAGTGGGTGTTTATGAGATTCCATCTCATTACATATTGAAACGTTGGACAAGGGATGCGAAGAATGTGGATGTATTTGACGAAGATTGTTCGGGAGCAGACGACAGTGGTCCTGAGTTCATTGCAAAGTGTTTCAACGACCTACACGCAGACTGCATCAAACTTGCTGTGGAAGGATCTTTATCTAAGGAGAGATATAGAATTGCAAAAATTTTCCTAAAAGAAGCACTGATAAAAGTGGCATCTATGGATAAATTACCTGCTAGTTGTACCCAGTACAAAGTCAAAGAAGGAAGTCAAGCAGATAACACGGCGTCCAAACTAGTTGTATGTGATCCTCAGCCCTCAAATTCAGAAGGGCCACCATCTAAAAGAATCAAATCTGGAGTGGAAAAGAGTGCAACAAAGGTGGATGCATGCAGTCATTGTAAAAAGTCAGGTCACAACATCGAAACGTGTATGGAGGCACAACCATGTTTAGGAGTACTTGTCAATCGAAGTATTGTACAAGAGTTCTTGCAACAGAAACAAATTGATTCCGGTGTACCAGAACATGTCGATCACTGCAGCTTACAAGAAAACTTGCAACAGAAGGTTTGA 2385 0.3929 MDIEPRMTKDIMEETSKSRDCIAVEDVEPCAGMNEVEENYGMRECTAIEDANLDPYVGMEFESEQATYSFYNEYAKRVGFCIRKRFIRRSRTNNEVICRTYVCSREGLKKTKKEVDKPRPNTRLDCKAMMKVKRDGNGKWVMIQFIKEHNHKLNPESVCLSRPRRKISRAKKNIRTSKSSGMQVSKIMSRATKQSGGVNNVLATDKDNRNFVDKERQEFLSAGDAQIIYEYFMRTQASNPRFFYAMQLDEEQHLRNVFWADTKSRMSYAHFGDVITFDTTYLTKKYEMKLALFIGVNHHGQSVLLGCALITDETTAAFIWVFKTWLTAMQGRPPKAIITDQHMAIKDAIAEVFPEAHHRLCLWHIMKKVPEKLGSVCKANVGFMSKFDECIYDSLTVDEFEKRWKNLIEAYKLTDHEWLRTMYEDRSQWIPVYLKDTFFAGMSTSQRSESINSFFDDYVSQKTSLKEFIDKYELALLRRYNDEEKADLETYHKTPDLKTGSPFEAQMASIYTMDIFKKFQDEVLHIPSCNAVHIAQEEGANATYVVKELIMKPNGQRVTRDYTVLWSGSETTISCICRLFQFKGYLCRHAMVVLFAVGVYEIPSHYILKRWTRDAKNVDVFDEDCSGADDSGPEFIAKCFNDLHADCIKLAVEGSLSKERYRIAKIFLKEALIKVASMDKLPASCTQYKVKEGSQADNTASKLVVCDPQPSNSEGPPSKRIKSGVEKSATKVDACSHCKKSGHNIETCMEAQPCLGVLVNRSIVQEFLQQKQIDSGVPEHVDHCSLQENLQQKV* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00391 794 MobiDBLite consensus disorder prediction 705 725 - -
Eupl03g00391 794 SMART 26again6 573 600 IPR006564 GO:0008270
Eupl03g00391 794 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 676 IPR031052 GO:0006355
Eupl03g00391 794 Pfam MULE transposase domain 274 368 IPR018289 -
Eupl03g00391 794 ProSiteProfiles Zinc finger SWIM-type profile. 562 598 IPR007527 GO:0008270
Eupl03g00391 794 Pfam FAR1 DNA-binding domain 69 155 IPR004330 -
Eupl03g00391 794 Pfam SWIM zinc finger 562 597 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00391 Eupl-Chr3 17163340 17165920 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl03g00391 MULE 8.2e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00391 - - nnu:104611783 964.526