Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00389 ATGCTTTCCAGTTCCTTGGCATACTGGGCACTCAAGCAAAGAAGGCTGATCAAACTCAAAGAGAAATTCTTCCAACAGAATGGAGGTTTACTGTTGCAACAACAAATCACTTCACGTACCGGTGCTTCAGAGATTGCCAAGATTTTTACCGTAGAAGACTTAAAAATGGCAACCAACAACTACGATGAGAGTCGGGTTCTTGGCCAGGGAGGTTATGGTACGGTGTACAAAGGAATTTTACCAGATAAGAGAGTAGTAGCCATTAAGAAGTCCAAATTAATGGATGAGAGCCAAATTGCACAGTTCATAAATGAGGTGGTCATTCTTTCTCAAATCAACCATCGGAATGTGGTAAAGATCCTGGGTTGTTGTTTAGAGACTGAAGTTCCCTTGTTAGTTTACGAATTCGTTTCCAATGGTACTCTCCTCCAACGCATCCGTAATGAGAGCAATGTAACTACCATTTCATGGGGTTACCGCTTAAGGATTGCCTCGGAAACTGCAGGAGCACTTGCTTATTTGCATTCAGCGCACTCCATACCAGTCCTTCATAGAGATGTCAAGTCTGCCAACATACTATTAGATGATAATTACATTGCAAAAGTATCTGATTTTGGAGCTTCAAGGTTGGTTCCTCTTGATCAAACTCAAATGCCTACACTGGTTCAAGGGACCTTAGGATACTTAGATCCAGAATGTTTTCAAACCGGTCAATTAACTGAGAAAAGCGATGTTTATAGCTTTGGTGTTGTTCTTGTGGAACTTTTAACTGGGGAGAAGCCAATTTCATTCGAAAGATCTGAAGAACATAGAAGTTTGGCTATGTATTTCATATCTTCAATCAAAGAAAACCGTCTATTCCAAATTCTTGACGATCGAGTTGTGAATGAAGGAGACAAAGAGCAACTACTGGCGGTTGCTAAGCTTGCAAGGAGATGCCTAAAGCTAAAAGGGGGAGATAGACCTACAATGAAGGAAGTGGCAGCAGAGTTGGACAAATTGAGAATGTTCCAAGAGCATCCATGGGTGCAACAAAACCACGAAGAGGCCGAAATTTTGCTAGGTGAACAATCAAATTCTTCCACTAGTGATCCAACCAGTCAATATAATGTGGGGAATGACTTCATGCTACCACTAGAGATTGCCGGATGA 1152 0.4149 MLSSSLAYWALKQRRLIKLKEKFFQQNGGLLLQQQITSRTGASEIAKIFTVEDLKMATNNYDESRVLGQGGYGTVYKGILPDKRVVAIKKSKLMDESQIAQFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFVSNGTLLQRIRNESNVTTISWGYRLRIASETAGALAYLHSAHSIPVLHRDVKSANILLDDNYIAKVSDFGASRLVPLDQTQMPTLVQGTLGYLDPECFQTGQLTEKSDVYSFGVVLVELLTGEKPISFERSEEHRSLAMYFISSIKENRLFQILDDRVVNEGDKEQLLAVAKLARRCLKLKGGDRPTMKEVAAELDKLRMFQEHPWVQQNHEEAEILLGEQSNSSTSDPTSQYNVGNDFMLPLEIAG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00389 383 FunFam Wall-associated receptor kinase 2 31 136 - -
Eupl03g00389 383 Gene3D Phosphorylase Kinase; domain 1 27 136 - -
Eupl03g00389 383 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 343 IPR045274 GO:0007166
Eupl03g00389 383 CDD STKc_IRAK 67 334 - -
Eupl03g00389 383 Pfam Protein kinase domain 61 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00389 383 ProSiteProfiles Protein kinase domain profile. 61 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00389 383 FunFam Wall-associated receptor kinase 2 137 354 - -
Eupl03g00389 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Eupl03g00389 383 Gene3D Transferase(Phosphotransferase) domain 1 137 360 - -
Eupl03g00389 383 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Eupl03g00389 383 SUPERFAMILY Protein kinase-like (PK-like) 44 331 IPR011009 -
Eupl03g00389 383 SMART serkin_6 61 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00389 Eupl-Chr3 17101166 17102999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00389 1 367 Receptor kinase-like Gene Family AT1G21230 55.978 6.41e-143 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl03g00389 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00389 - - nnu:104596880 573.933