Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00356 ATGGTAGGTAAGAGGAGCCGTCGACAATTAAAGGAGAAGCGCCAGGGGGATGCTTCACCTTATAAAGACGTATCACCTAGCAGCTTTAAGGGGTCACATTGCAGGCAGATAATGACTAATTACAAGTATGATGCTGTAAAAGATATAGATATACAAAGTGAGTATGCTCCAGAACCAGTTTTTGATCTACGCTTGGAGGCAAAAATAGCAGCTGAGGAAAATGCGCGCTTGTTTGCAGGAAGGCAAACACATCCATTTTTTTCAGCGCGGAAAGTGGGTAAAAAATTTCAAGAGAATTTGGAGGCAACAGAACTGGAGAGTAATTGGTGCTCGGTTTTGCAAGAGGATAAAACCATTACTTGTCGTCCTATTCATGTGTTTGAGATGCTGCAGGATGATCTCGTGATATTGGATTGGAGAAATTGGATATTTTGTGATAAAACCTTACTCAATTCCAGTTGTGCTTTAGAAAATGCACATTTATCAGTCTTTGAAGACTCTGTTGAGCCCTTAAAATTTAATGACTTTCTTACCATTTCAATTCCTGTTGGAACATTTCTTCACTATGAGGTGTCTTCAGAGAAATCTGCGGAAGTAAAAAATGTGTATCTGATGTCACCAACAACCTCTTCTGTGTCATTTGATGGGCGAGGGTTACACCATCAGCTGGAGTACTTACAAGTGATCCATGAAAGGAACCAAGCTGGTTTGTCTGTGGGATATGCTGGTCCTGTAAGAAAGTTTGACATTGAGTCGCAGGACAGGATGAGGTCATACTATCTTGATTGTGGTAGTCAGCCTGACAATCGCTTATGGACAAACAAATACCAGCCGGGAAAGGCCTTTGAGGTATGCGGTAATGGTGAATCTGTAAGGTTGCTTAATGAATGGCTGTGCTCTTGGCGTGAACGAGATCTTCAAACCCTTAAAAATTCCACTGGTGGTAGTAAATGTATTGTTCACAATAACTATAGCTGGAACAACGAAAATGACTCTGATACAGAAAGCATTGACGAAGGAGCTAGCTTCAAGAATGTTATTTTAGTTACTGGACCAGTTGGGAGTGGAAAAACTGCTGCTATTTATGCCTGTGCGAAAGAGCAAGGGTTTCAAGTAATTGAGGTCAGTGCGTCTGATTGGCGAAATGGAGCTCACGTGAAGCAAAAGTTTGGAGAGGCAATGGAATCACATCGGTTTAACCAATGGTCACTGGAGAATCCTGTGGGTTCACGAAGGAAGCTAATTCAGGAATTTCCCTCAGCCCAGCTAGGTAACTCATCAGCCCAAGAGTTTGACAATGAGGTAGTTGAACTGATTTCTGACGAGGAAAAGTCGGAAAATGTAAAGCAAGAGTCTGGGAATGTTGTTGAGAAGGACAATATAACTTCCTGTAGTCGAGGTGCAAATAAGACTCTGATTCTCTTCGAGGATGTGGATACCATTTTTGATGAAGATCGTGGTTTTATTGCTACAATACAGCAACTTGCTGAAACAGCCAAGCGTCCCATGATACTCACGAGCAACAGTAAGGATCCTGTCTTGCCAGATCAATTGGATAGGCTAGAGGTTTGTTTCACAATTCCATCGCCAAAGGAGGTTCTTCCCCATTTATCCATGGTTTGTTCTGCAGAAAATGCCAACCTCCAGCCCCAGTTAATAGAGCGATTTATTGGATGCTGTCAAGGTGACATCCGGAAAACCATTATGCTCCTCCAGTTCTGGTGCCAGGGTGAAAGAAATCTAAAAGACAGGAAACAGCAGTGTGCATATGGCCTACTGCAATTTGATCTTGATGCAGGGCATTGGATCCTACCAAAGGTAATTCCCTGGGGATTTCCTTGTCAATTATCAAAGCTAGTGGAGGAAGAGATCACCAAGTCATTGTCCGTGGTGAAAGAGAATTCCTTACTAGAGGTAGTGGAGGAAGAAGAGCTCAGCTCTAAGGAAATGCAGGCGGCCTTGGAAATGGGTTTTAACAATGAAACAGACAGTATTGAAGTTAGGAAAGAAGCCATGCTAAGCAGGAATTGTTTTGTTCACGACAGCAATGGATTTTCTGCTCAATTTGATAATGTTGCCGATTTCTCCAATTCGTCAGGATCCCCAGTTGCATTCACTCGGCGAACTGCAAGACGAAGATCAAGTACAGTACTGTCTTCCCATTCTGGAGATGAACTCTGCAGTGACAACACTCCAGTGGCTTCAGATATTCACTCTGGTGATCCTAACAACGATGTATTTCCAGGTGTCTCTGGTAAGTCCCTTGCTCTCAGGGTGGCTTCTCAAGAATACCTAGACCCATCTACTGACCAACTGTGTCATTCTGAGAGGAAAATATCAGAACAAAACCTATATAAATGTTCTGAAGCCGAAAGTGGTCAACACATGTGTGACACATACAAATCAGTAGATATATCATGTGTGCCTGAATCATCACTTGTTCCCGAAACTGAAATCAACAATGGAGTGGAGTTGTTATCGAAGACGGTATCTTGTGGCCGTGTAGCTGTTACTTTAGAAGCAGTCTCTTTGAGCAGTGTCAAGTCAATTCAAAGCCTGTCCATGATAGATTTTAACAATCTAAATAAAGTTATACCAGAATTAGATAAAAATACAGATCCCAGATTGAGAAATACATGTAATTTAGATGAAGAATCGGTTCACATAGATGAGGAAGTAGGGGATTCTCAGAGTGAACATGCAGAGGCTGTATCCAGAGGATATCAAGTGATGGATGAGTGTAGCCGTGCCGATTTCAACATGGCTTCTGTTTCTGTGGAGAATCCTAGCTGCCTGGTACTAGCTGGTCCATTGCAGGAAACATGGAGAAAACTACGTAGCCGTCGTGCGGATCTCAAATTGTATGTCACCTCAGAACAGAAAGACGCTTCTCGGATAGTAAAACTTGCTTCTGGAATGACCGATCTATTCTCTGAAGCTGACTTGATGCTTGGTTGCTGCCAACCTCTTATCAATGACTCCTTGGAACCAACGATGGTGCCTTCTGTGGAACCAGATGCATTCTGCTGGTACCATGAGCAACTGGAGATGACATCCACGATTGCGCAACATGGCCTTTGCTTTTTTGCAAAGGAATCTGCTGCAATCGGATCAAACTCGGGTTCCAAAAATAGGGTGGATTTAGCTTGGGAGATGCTGACCTCCACAACTAACACAATGGCACTGGGGAAGCTGGTCACCCAAGATTTGAGCACCAGTCAGAATTCATGTGCTGGAAAGAGTGTGGAGATTGGGCCACCAAGAAGTGGCATATCCTTTAAAAGAGAATTAGAGGCACGTCTTTGTAATATGATTCGGCCCATAGTTCCTTCAAGATCGTACTTGACAATGAAAGGTGCTGCATTCCACGATTATCTGTCTTCCCTGGGCCAGATTTCCAAGTTAGAAGCTTCTCGTCTATCAGAGAGCTGTGATAAGACAGAGAAGAAACGCAGGGCACGGACTGCTCGACACTACTTAAGTACTGGCCCTTTGACGTTATCTCCTGAAGAAGTGTCGTTACTGGCTCAGCATAGCTGCTATGGCAAGGTAGCACTGGAATTTAGGGAGGCAACTTATAGATAG 3585 0.4332 MVGKRSRRQLKEKRQGDASPYKDVSPSSFKGSHCRQIMTNYKYDAVKDIDIQSEYAPEPVFDLRLEAKIAAEENARLFAGRQTHPFFSARKVGKKFQENLEATELESNWCSVLQEDKTITCRPIHVFEMLQDDLVILDWRNWIFCDKTLLNSSCALENAHLSVFEDSVEPLKFNDFLTISIPVGTFLHYEVSSEKSAEVKNVYLMSPTTSSVSFDGRGLHHQLEYLQVIHERNQAGLSVGYAGPVRKFDIESQDRMRSYYLDCGSQPDNRLWTNKYQPGKAFEVCGNGESVRLLNEWLCSWRERDLQTLKNSTGGSKCIVHNNYSWNNENDSDTESIDEGASFKNVILVTGPVGSGKTAAIYACAKEQGFQVIEVSASDWRNGAHVKQKFGEAMESHRFNQWSLENPVGSRRKLIQEFPSAQLGNSSAQEFDNEVVELISDEEKSENVKQESGNVVEKDNITSCSRGANKTLILFEDVDTIFDEDRGFIATIQQLAETAKRPMILTSNSKDPVLPDQLDRLEVCFTIPSPKEVLPHLSMVCSAENANLQPQLIERFIGCCQGDIRKTIMLLQFWCQGERNLKDRKQQCAYGLLQFDLDAGHWILPKVIPWGFPCQLSKLVEEEITKSLSVVKENSLLEVVEEEELSSKEMQAALEMGFNNETDSIEVRKEAMLSRNCFVHDSNGFSAQFDNVADFSNSSGSPVAFTRRTARRRSSTVLSSHSGDELCSDNTPVASDIHSGDPNNDVFPGVSGKSLALRVASQEYLDPSTDQLCHSERKISEQNLYKCSEAESGQHMCDTYKSVDISCVPESSLVPETEINNGVELLSKTVSCGRVAVTLEAVSLSSVKSIQSLSMIDFNNLNKVIPELDKNTDPRLRNTCNLDEESVHIDEEVGDSQSEHAEAVSRGYQVMDECSRADFNMASVSVENPSCLVLAGPLQETWRKLRSRRADLKLYVTSEQKDASRIVKLASGMTDLFSEADLMLGCCQPLINDSLEPTMVPSVEPDAFCWYHEQLEMTSTIAQHGLCFFAKESAAIGSNSGSKNRVDLAWEMLTSTTNTMALGKLVTQDLSTSQNSCAGKSVEIGPPRSGISFKRELEARLCNMIRPIVPSRSYLTMKGAAFHDYLSSLGQISKLEASRLSESCDKTEKKRRARTARHYLSTGPLTLSPEEVSLLAQHSCYGKVALEFREATYR* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00356 1194 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 7 1185 IPR004582 GO:0006281
Eupl03g00356 1194 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 530 591 - -
Eupl03g00356 1194 Gene3D - 269 525 IPR027417 -
Eupl03g00356 1194 SMART AAA_5 343 529 IPR003593 GO:0016887
Eupl03g00356 1194 Pfam ATPase family associated with various cellular activities (AAA) 347 528 IPR003959 GO:0005524|GO:0016887
Eupl03g00356 1194 MobiDBLite consensus disorder prediction 699 738 - -
Eupl03g00356 1194 MobiDBLite consensus disorder prediction 1 30 - -
Eupl03g00356 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 577 IPR027417 -
Eupl03g00356 1194 Gene3D - 530 591 - -
Eupl03g00356 1194 MobiDBLite consensus disorder prediction 699 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00356 Eupl-Chr3 14698604 14758353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00356 272 573 Core DNA Replication Machinery Family AT5G22010 22.368 2.79e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00356 K26118 - nnu:104609641 1202.19