Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00355 ATGGAGAAATCGGTCGAGGAAGATAAATTGGTGGTGGTGGACCCCAAGGACGCCAATCCCCCGCATTCTGAAAGGAGAACTCTGGGTCGGAGACTTATTCAGTCAACACTTTTCCGGCACAGATCTCAAGACAACGAAGACAACGGCAAAGATGAAGAAGACGTAGATGAATATTGTGGAAGTCAGAGTAGGAGTAAGATCAAGAAGAGGAAGAGAAAGGGAAAGCCCAAACCAACTACTCCCATTAAGGCTTCTGTTATAGGCGAAGGGGTTGGCCGGAAGACAGAAAGCAGAAATTCTCCACTCACTGATGGTAAGAGGAGCCGTCGACAATTAAAGGAGAAGCGCCAGGGGGATGCTTCACCTTATAAAGACGTATCACCTAGCAGCTTTAAGGGGTCACATTGCAGGCAGATAATGACTAATTACAAGTATGATGCTGTAAAAGATATAGATATACAAAGTGAGTATGCTCCAGAACCAGTTTTTGATCTACGCTTGGAGGCAAAAATAGCAGCTGAGGAAAATGCGCGCTTGTTTGCAGGAAGGCAAACACATCCATTTTTTTCAGCGCGGAAAGTGGGTAAAAAATTTCAAGAGAATTTGGAGGCAACAGAACTGGAGAGTAATTGGTGCTCGGTTTTGCAAGAGGATAAAACCATTACTTGTCGTCCTATTCATGTGTTTGAGATGCTGCAGGATGATCTCGTGATATTGGATTGGAGAAATTGGATATTTTGTGATAAAACCTTACTCAATTCCAGTTGTGCTTTAGAAAATGCACATTTATCAGTCTTTGAAGACTCTGTTGAGCCCTTAAAATTTAATGACTTTCTTACCATTTCAATTCCTGTTGGAACATTTCTTCACTATGAGGTGTCTTCAGAGAAATCTGCGGAAGTAAAAAATGTGTATCTGATGTCACCAACAACCTCTTCTGTGTCATTTGATGGGCGAGGGTTACACCATCAGCTGGAGTACTTACAAGTGATCCATGAAAGGAACCAAGCTGGTTTGTCTGTGGGATATGCTGGTCCTGTAAGAAAGTTTGACATTGAGTCGCAGGACAGGATGAGGTCATACTATCTTGATTGTGGTAGTCAGCCTGACAATCGCTTATGGACAAACAAATACCAGCCGGGAAAGGCCTTTGAGGTATGCGGTAATGGTGAATCTGTAAGGTTGCTTAATGAATGGCTGTGCTCTTGGCGTGAACGAGATCTTCAAACCCTTAAAAATTCCACTGGTGGTAGTAAATGTATTGTTCACAATAACTATAGCTGGAACAACGAAAATGACTCTGATACAGAAAGCATTGACGAAGGAGCTAGCTTCAAGAATGTTATTTTAGTTACTGGACCAGTTGGGAGTGGAAAAACTGCTGCTATTTATGCCTGTGCGAAAGAGCAAGGGTTTCAAGTAATTGAGGTCAGTGCGTCTGATTGGCGAAATGGAGCTCACGTGAAGCAAAAGTTTGGAGAGGCAATGGAATCACATCGGTTTAACCAATGGT 1513 0.4276 MEKSVEEDKLVVVDPKDANPPHSERRTLGRRLIQSTLFRHRSQDNEDNGKDEEDVDEYCGSQSRSKIKKRKRKGKPKPTTPIKASVIGEGVGRKTESRNSPLTDGKRSRRQLKEKRQGDASPYKDVSPSSFKGSHCRQIMTNYKYDAVKDIDIQSEYAPEPVFDLRLEAKIAAEENARLFAGRQTHPFFSARKVGKKFQENLEATELESNWCSVLQEDKTITCRPIHVFEMLQDDLVILDWRNWIFCDKTLLNSSCALENAHLSVFEDSVEPLKFNDFLTISIPVGTFLHYEVSSEKSAEVKNVYLMSPTTSSVSFDGRGLHHQLEYLQVIHERNQAGLSVGYAGPVRKFDIESQDRMRSYYLDCGSQPDNRLWTNKYQPGKAFEVCGNGESVRLLNEWLCSWRERDLQTLKNSTGGSKCIVHNNYSWNNENDSDTESIDEGASFKNVILVTGPVGSGKTAAIYACAKEQGFQVIEVSASDWRNGAHVKQKFGEAMESHRFNQW 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00355 504 MobiDBLite consensus disorder prediction 1 132 - -
Eupl03g00355 504 Gene3D - 371 504 IPR027417 -
Eupl03g00355 504 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 7 500 IPR004582 GO:0006281
Eupl03g00355 504 Pfam ATPase family associated with various cellular activities (AAA) 449 487 IPR003959 GO:0005524|GO:0016887
Eupl03g00355 504 MobiDBLite consensus disorder prediction 1 29 - -
Eupl03g00355 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 495 IPR027417 -
Eupl03g00355 504 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00355 Eupl-Chr3 14616203 14694395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00355 374 487 Core DNA Replication Machinery Family AT5G22010 28.947 1.84e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00355 K26118 - nnu:104609641 447.203