Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00338 ATGGAGACTATGAGAAATGTGCAAGACACATCACCTCACGAGTTTGAGAAGGCTTATTCAACGCACCTCAAGCGTTCGGGGAAGATGGAGCTTCCTCACTGGACTGATATTATGAAGACTAGTATGTTCAAGGAGCTTTGCTCCATATGA 150 0.4467 METMRNVQDTSPHEFEKAYSTHLKRSGKMELPHWTDIMKTSMFKELCSI* 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00338 49 Pfam Ribosomal protein S19e 6 46 IPR001266 GO:0003735|GO:0005840|GO:0006412
Eupl03g00338 49 Gene3D - 1 49 IPR036388 -
Eupl03g00338 49 SUPERFAMILY "Winged helix" DNA-binding domain 6 47 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00338 Eupl-Chr3 12653424 12653573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00338 1 47 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 65.957 8.14e-19 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00338 K02966 - ming:122075797 82.0333