Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00318 ATGGGATCCACATCCACCTTCATCTTATCCTTCACCACCGTGCTTTTATCCTACGCACTTCTCCCTCTCCCCTCCTTCTCCGGCCGCCTCAACCTCGAATTCATCTACCCAAACTTCACCGCTTCAAACTTCCAATTCGTCGACAACACCGGCGCTTTTTTATCCTCTCGTAATGGAACCTTTAGAGCCGCTATCTTCAACCCCGCTGCTCAAGCGGCCAACGTTTACTTCTCCGTCTTCCACGTGGCATCCAACAAGATCATCTGGTCCGCCAATCGCGATTCTCCGATCTCGATTTCCGGTGAGTTGACTCTAACAGTCAACGGTATCACCATCTTCGATGAAGATGGTAATCCCAAATGGTCAACGCCGAAGTTTAATTCAACCGTTAAGGCGTTACACCTTATGGAGACTGGTAATCTCGTCTTGCTCGATCAATTCAATGCTTCTCTCTGGGAAAGCTTCAATTTTCCGACGGACACGATTGTGATCGGACAACAATTCCATGTCAGGGCATCACTATCCAACGGTGATTACCGGTTTTTTATTACGGATCAAGATGGGGTACTTCAATGGAATGGGCTTACATATTGGATGTTGTCAATGGATAAATCTGCGTATAGGGACTCGAGTTATCCGGTGGCGTATATGGCGATGAACGCCACCGGTCTTTATCTATTCGACGACGACGGATTGGTTGTGATTCAGATGACCATGGCTGCATCGAATTTCCAAATTGCAACATTGAATTCTGATGGCCAATTTAGTGTCGGTAGCTTCTCTGATACCAACCAGGAATTTGTTTGGCCGGGTGACTATTGCCGAATACCGTTCATCTGCGGTAGAAATGGATTGTGCACCACCAATGCTGGATCGAATACCGGCACCTGTTCATGTCTGCCGGGCTTCCACAATGATCCACATACCAAAACTTGCTTACCAACCAATTCTGATTCTCTTCCTTCTGCTTGCAATATTTCTAGTACTCTTAATGGTACTAATCAGAACAATTCATCAGAGATTTCATATATCAGCCTCGGCCAAGGTATGGACTACTTCACTAATGAATTCTTGGAGCCTGTTACTAATGGCGGCAATTTCTCAGCTTGTCAAGATCTTTGCTCCAAGAATTGTTCTTGCTTGGGTTTTTTCTATGCAAATTCTTCTGGTTATAATTGTTATCTGCTTAATAACCATTTGGGGTCCATGTTTACCATGGCAAGTGATGATGATGAGACTAATCGGTTGGGCTATATTAAGACGTTGCACGAATCGTCGCCAGTGACTCCAAATGGTAACAACAGTATTGATGATGATCCGATACGAGATTTCCCCATCGCCGCTTTGGTGCTTTTACCTTCCACTGGATTCTTTCTAGTGATCACTATCTTGGTCATCGGTTTCCTTTGGTGGAGAAGACGGCGACTCTCCAAAGCCACCGCAGTAAAATTAGGTCGCTTGAACTCGACTTCTTCAACGGAGCTTGACGTGATATCCATCCCAGGCTTACCAGTTAGATTTGATTATGAAGAACTCAAGACAGCGACGGATAATTTCAACACCCATATCGGGTCTGGCGGGTTTGGATCCGTATACAAAGGAACCCTACCCGACAAGACCTTTGTCGCGGTGAAGAAGATAACCAATTTAGGCATCCAAGGAAAGAATGAATTCTGCACTGAAATTGCAATTATTGGCAACATTCACCATCTTAACCTAGTGAAATTGAGAGGATTCTGTGCCCAAGGGCGACAACGGCTACTTGTGTATGAGTACATGAACCGTGGCTCACTAGACCGGACCCTCTTTAGTGCAAGACCAGTCTTAGAATGGCAAGAGAGGGTTGACATAGCCTTAGGAACAGCACGAGGGCTAGCTTACTTGCATAGTGGATGTGAACACAAGATCATACACTGTGATGTCAAACCAGAGAACATTCTATTGCATGATCATTCTCAGGTGAAGATCTCGGATTTCGGACTTTCGAAACTTCTAAGCCCTGAGCAATCTAGTCACTTCACTACAATGAGAGGGACACGTGGCTATCTTGCACCTGAATGGTTAACTAGTTCTGCAATCTCTGATAAGACAGATGTGTATAGCTATGGCATGGTACTACTAGAAATCGTGAGTGGGAGGAAGAACTGCTCCTTACAAACACAAATACAAAGCCACAGCATTAAAGATGATCAGAGCAGTGGAAGTGGTCAGTCGTCGTCGTCGTCGCCGTCTGTACCCATTTATTTCCCTCTCTTTGCATTGGATATGCATGAGCAAAGTAGGTATTTGGAGCTTGCAGACTCAAGGTTGGAGGGACGGGTGACAAATGAAGATGTGAAGAAGCTTGTGTGTGTGGCCTTGTGTTGTGTCCATGAGGAACCAATGCTGAGGCCTAGCATGGCTAATGTGGTTGGCATGCTAGAAGGTGGGATCCCCTTAGGAGAGCCAAGGGTCGAGGCATTGAACTTCTTGCGGTTCTACGGACGACATTTCAAAGAGGGATCGGTCATGGGGTCCAATGGAGGGAATGAATTCATGTTGTATCCACAGGCAAATGCTTCTGTAACGAACAGCACCAGTGACTCGCGCGACTCTCTTTCTTTCCTCTCGTCGCAACAGGTCTCTGGTCCGAGGTAG 2637 0.46 MGSTSTFILSFTTVLLSYALLPLPSFSGRLNLEFIYPNFTASNFQFVDNTGAFLSSRNGTFRAAIFNPAAQAANVYFSVFHVASNKIIWSANRDSPISISGELTLTVNGITIFDEDGNPKWSTPKFNSTVKALHLMETGNLVLLDQFNASLWESFNFPTDTIVIGQQFHVRASLSNGDYRFFITDQDGVLQWNGLTYWMLSMDKSAYRDSSYPVAYMAMNATGLYLFDDDGLVVIQMTMAASNFQIATLNSDGQFSVGSFSDTNQEFVWPGDYCRIPFICGRNGLCTTNAGSNTGTCSCLPGFHNDPHTKTCLPTNSDSLPSACNISSTLNGTNQNNSSEISYISLGQGMDYFTNEFLEPVTNGGNFSACQDLCSKNCSCLGFFYANSSGYNCYLLNNHLGSMFTMASDDDETNRLGYIKTLHESSPVTPNGNNSIDDDPIRDFPIAALVLLPSTGFFLVITILVIGFLWWRRRRLSKATAVKLGRLNSTSSTELDVISIPGLPVRFDYEELKTATDNFNTHIGSGGFGSVYKGTLPDKTFVAVKKITNLGIQGKNEFCTEIAIIGNIHHLNLVKLRGFCAQGRQRLLVYEYMNRGSLDRTLFSARPVLEWQERVDIALGTARGLAYLHSGCEHKIIHCDVKPENILLHDHSQVKISDFGLSKLLSPEQSSHFTTMRGTRGYLAPEWLTSSAISDKTDVYSYGMVLLEIVSGRKNCSLQTQIQSHSIKDDQSSGSGQSSSSSPSVPIYFPLFALDMHEQSRYLELADSRLEGRVTNEDVKKLVCVALCCVHEEPMLRPSMANVVGMLEGGIPLGEPRVEALNFLRFYGRHFKEGSVMGSNGGNEFMLYPQANASVTNSTSDSRDSLSFLSSQQVSGPR* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00318 878 CDD EGF 274 308 - -
Eupl03g00318 878 PIRSF SRK 5 865 IPR024171 GO:0004674
Eupl03g00318 878 Gene3D - 49 175 - -
Eupl03g00318 878 Pfam D-mannose binding lectin 87 171 IPR001480 -
Eupl03g00318 878 MobiDBLite consensus disorder prediction 856 878 - -
Eupl03g00318 878 FunFam serine/threonine-protein kinase PBS1-like 486 592 - -
Eupl03g00318 878 Gene3D Phosphorylase Kinase; domain 1 479 592 - -
Eupl03g00318 878 Pfam Protein kinase domain 520 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00318 878 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 49 810 - -
Eupl03g00318 878 CDD STKc_IRAK 523 809 - -
Eupl03g00318 878 SMART blect_4 45 158 IPR001480 -
Eupl03g00318 878 ProSitePatterns EGF-like domain signature 2. 297 312 IPR000742 -
Eupl03g00318 878 CDD B_lectin 47 158 IPR001480 -
Eupl03g00318 878 ProSiteProfiles Protein kinase domain profile. 517 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00318 878 SMART serkin_6 517 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00318 878 FunFam Serine/threonine-protein kinase 593 815 - -
Eupl03g00318 878 Pfam S-locus glycoprotein domain 233 305 IPR000858 GO:0048544
Eupl03g00318 878 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 198 IPR036426 -
Eupl03g00318 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Eupl03g00318 878 ProSiteProfiles Bulb-type lectin domain profile. 38 156 IPR001480 -
Eupl03g00318 878 SUPERFAMILY Protein kinase-like (PK-like) 495 807 IPR011009 -
Eupl03g00318 878 Pfam PAN-like domain 362 401 IPR003609 -
Eupl03g00318 878 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Eupl03g00318 878 Gene3D Transferase(Phosphotransferase) domain 1 593 811 - -
Eupl03g00318 878 ProSiteProfiles EGF-like domain profile. 270 313 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00318 Eupl-Chr3 11492300 11495150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00318 446 816 Receptor kinase-like Gene Family AT5G20050 39.899 1.58e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl03g00318 Pkinase 1.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00318 - - nnu:109115584 1063.14