Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00313 ATGCTCACGGTCATGGAAGAAGCTACTGAGCTCGATTTCTCGGGTTGCAGCACGACGACTACCACGGAAGATGATGCTGCGTGTACTTGGAACGATTGGTCTCCGGTTGTCGATTGGGATGCTTTTCCTGGCGCCCATGATGACTTCCGGGGACTCATTGAATCTATGATGCAGGGTGATGATGATGATGATGATGAACCCGATCGTGTTTCTGTTCAAGATGGGTCCAATTCGATATCGATAACGCCGTCCACAACGACGATGATGATTGAAGAAGAAACTAACGATGATGATTTTAAAGGTTTGAGGCTTGTGCATCTTTTGATGGCTGCCGCGGAGGCGTTAACCGGGGCGAACAAGAGTCGGGATCTGGCTCGGGTGATATTGGTTCGGCTCAAGGAGTTGGTTTCTCCTACAAACGGTACTAACATGGAACGCCTTGCGGCGTATTTTACTGAGGCTTTGCAGGGTTTGCTAGATGGAGCCGGTGTGCACGGTAAGCATCATAACTCGATGATTAGTAATGGGTCCCTCCGTGACGATCCCCATCACAATCATAGTCACCATCAGAGCGACGTTCTCGCTGCGTTCCAGCTCTTACAGGATATGTCACCCTACGTTAAGTTTGGACACTTCACAGCCAATCAAGCTATTCTAGAGGCCGTCGCGCATGATAGAAGGGTTCACATAGTGGATTATGATATCATGGAAGGGATACAGTGGGCCTCCTTGATGCAAGCTCTCGTCTCCAGGAAAGATGGCCCACCGGCACCTCATCTCAGGATCACCGCGATTACTCGCGGTGGCAACGGTAGAAAATCAATCGGGACCGTCCAAGAGACCGGCCGACGATTGATCGCCTTCGCAGCATCGATCGGTCAACCTTTCTCGTTTCATCAGTGTAGGTTAGACCCTGACGAAACGTTTCGACCGTCGGCTTTGAAGTTGGTGAGAGGAGAGGCTTTAGTGGTCAACTGTATGCTCCATTTCCCACACTTTAGCTATCGTGCGCCGGACTCAGTGGCGTCTTTCTTATCCGGCACGAAGGCGCTGAACCCAAGGCTGGTGACATTAGTTGAGGAGGAGGTGGTAGCAACAGGTGACGGTGGGTTCGTGGGGCGATTCATGGATTCGCTCCACCATTACTCAGCCGTGTACGACTCGCTCGAGGCCGGGTTTCCGATGCAAGGTCGGGCACGTACGTTAGTGGAGAAAGTGTTTCTAGGCCCGAGGATAGCAGGATCCCTGGCGAGGATCTATCGTGCGCGAGGGGAGGAGGAGGATGGGTGTTGTTGGGGGGAATGGATGGCTGGAGCTGGTTTTCGTCCGGTGGGCATAAGCTTTTTCAATCATTGTCAGGCAAAGTTGTTGTTGGGATTATTCAACGATGGATACAGAGTGGAGGAACTTGCTAACAATAAGCTCGTTTTAGGGTGGAAATCTCGGCGTCTGCTCTCTGCTTCTGTCTGGACCGCCGCTGCATCTCTAGATCCCACTTTTGCAAATTAG 1509 0.5169 MLTVMEEATELDFSGCSTTTTTEDDAACTWNDWSPVVDWDAFPGAHDDFRGLIESMMQGDDDDDDEPDRVSVQDGSNSISITPSTTTMMIEEETNDDDFKGLRLVHLLMAAAEALTGANKSRDLARVILVRLKELVSPTNGTNMERLAAYFTEALQGLLDGAGVHGKHHNSMISNGSLRDDPHHNHSHHQSDVLAAFQLLQDMSPYVKFGHFTANQAILEAVAHDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPAPHLRITAITRGGNGRKSIGTVQETGRRLIAFAASIGQPFSFHQCRLDPDETFRPSALKLVRGEALVVNCMLHFPHFSYRAPDSVASFLSGTKALNPRLVTLVEEEVVATGDGGFVGRFMDSLHHYSAVYDSLEAGFPMQGRARTLVEKVFLGPRIAGSLARIYRARGEEEDGCCWGEWMAGAGFRPVGISFFNHCQAKLLLGLFNDGYRVEELANNKLVLGWKSRRLLSASVWTAAASLDPTFAN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00313 502 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 487 IPR005202 -
Eupl03g00313 502 ProSiteProfiles GRAS family profile. 95 491 IPR005202 -
Eupl03g00313 502 MobiDBLite consensus disorder prediction 58 77 - -
Eupl03g00313 502 Pfam GRAS domain family 104 491 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00313 Eupl-Chr3 11328664 11330328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00313 63 496 GRAS Transcription Factor Family AT5G17490 34.529 2.00e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g00313 GRAS 2e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00313 - - vvi:100250491 727.628