Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00292 ATGGATTGGTATGAGTCAAAACAACACTCCACCTCTTGGGTTGATTTCCTTGATGCACTCATGAAGCGTTTCGGACCTCGTGGCTACGAAGACTTCAATGGAACATTATCAAAACTCCACCAAGTAGGAACCGTTGAAGCATATCAAACTGAGTTCGAAAGAATGGCATGTCGAGCCCATGATTGGACCGACGAACAACTCAAAGGATGCTTCATCAGCTGTCTACAAGATGAACTACGTCATGAGGCCAATAGGATAAAAAAGCTTGATATGATGAAAAGCTGCAGAGTAGCTCTTGAGGATGCCAATAAGAACAAAAACCGTTATACAGATGTCTTACCGTATGACGAAAACAGGGTAGTTCTCAAGTCATCTGAGGATTGCAGATCATCAGGGAGGGGTTATATCAATGCAAGCTTTATCAAGGTTGGTTCAACTGAAAGTGTTTCAAGTTTTATAGCCACACAAGGTCCACTGCCACCCACCTTCGAGGACTTCTGGGAGATGGTAATCCAGAATCACTGCCCTGTGATTGTGATGCTTACTCGGTTGGTCGACAATTACAAGATGGTAAAATGTGGAGATTATTTCCAAGCAGAAGATGGTACCAGAGAATTTGGTAAAATATGTATTGCCACTAAGTGGATCAGAACAACTGATGCTTCGTTGGTCTTGCGCTACTTGGAGGTGAAGTACAAAGAGTCAGAGGAGCCACCCCAGTCTGTTCTCCATATTCAGTACCCTGAATGGCCCGATCATGGAGTTCCCAGGGACACACTTGATGTTCGTGAAATTTTAAGAAGGATATATCATGTACCGCCCACTCTTGGCCCCATCGTTGTGCATTGCAGTGCAGGTATTGGAAGAACAGGTGCATTTTGTACAATTCTTAATACGATCCAAAGAATCCTTATTGGAGATATGTCTGCTTTAGATCTCGTTAATACTGTCACCAATTTCAGATCTCAGCGTAATGGCATGGTGCAAACAATGGAGCAATTCTTATTTTGCTATGATACCATAGTTGATGAATTGGAAAAGCTCACCTCAGACTCCAGTCCCTCGCAAGAGGAGCTCAAAAACTGCTGA 1089 0.4325 MDWYESKQHSTSWVDFLDALMKRFGPRGYEDFNGTLSKLHQVGTVEAYQTEFERMACRAHDWTDEQLKGCFISCLQDELRHEANRIKKLDMMKSCRVALEDANKNKNRYTDVLPYDENRVVLKSSEDCRSSGRGYINASFIKVGSTESVSSFIATQGPLPPTFEDFWEMVIQNHCPVIVMLTRLVDNYKMVKCGDYFQAEDGTREFGKICIATKWIRTTDASLVLRYLEVKYKESEEPPQSVLHIQYPEWPDHGVPRDTLDVREILRRIYHVPPTLGPIVVHCSAGIGRTGAFCTILNTIQRILIGDMSALDLVNTVTNFRSQRNGMVQTMEQFLFCYDTIVDELEKLTSDSSPSQEELKNC* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00292 362 SMART ptp_7 241 343 IPR003595 -
Eupl03g00292 362 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 75 347 - -
Eupl03g00292 362 ProSiteProfiles PTP type protein phosphatase domain profile. 79 344 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 Pfam Protein-tyrosine phosphatase 103 342 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 ProSitePatterns Tyrosine specific protein phosphatases active site. 281 291 IPR016130 GO:0016311|GO:0016791
Eupl03g00292 362 SMART PTPc_3 78 346 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 260 335 IPR000387 GO:0016311|GO:0016791
Eupl03g00292 362 Gene3D Protein tyrosine phosphatase superfamily 38 353 IPR029021 -
Eupl03g00292 362 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 77 346 IPR029021 -
Eupl03g00292 362 CDD PTPc_plant_PTP1 135 338 - -
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 240 257 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 311 326 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 134 141 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 327 337 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 152 172 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 PRINTS Protein tyrosine phosphatase signature 278 296 IPR000242 GO:0004725|GO:0006470
Eupl03g00292 362 FunFam Tyrosine-protein phosphatase non-receptor type 12 48 352 - -
Eupl03g00292 362 Pfam Retrotransposon gag protein 6 76 IPR005162 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00292 66 353 Protein tyrosine phosphatase (PTP) family AT1G71860 64.068 8.88e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00292 - - nnu:104596727 444.506