Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00269 ATGGCTGCGATTGCTGAAGAAGAGACTCCAAATGGAGGATCATCAGATGGTTCAGAAAGATCCCATGATCGGCAAAACTTTGATTCCCTAATCTCTTCTTGTTATCCGATTAATCTCAAGTTTATTGACATCTGTTACCGTGTCAAGTTGGAAAGAAAGAGCAGCGGCGATGGTGGTTGCATCGGACGCATGTTTGGTGCTGCTGGTGGACCCACACCCACTGACAAAAGGATAATGATGAAGAGCATGAGTGAGGAACGAACGATCCTAAGTGGAATCACGGGGATGGTATCTCCTGGAGAGATCCTAGCCATCCTTGGCCCATCAGGTAGTGGGAAATCGACGCTACTGAACGTTCTTGCAGGGAGACTACATGGGAACTGCTTCACTGGATCAGTCCTTGCCAACAACCGAAGACTTACCAAATCTGTATTGAGAAGAACTGGGTTCGTCACACAGGACGATATTCTCTACCCCCATCTCACCGTTAAAGAAACCCTAACCTTTTGTTCTCTGCTCCGACTACCAAACACGCTGTCGAAGAAGGAGAAAGTACTGGTGGCTGAATCGGTGATTTCCGAGTTAGGGTTGGGAAAATGCGAGAACACGATAATTGGAAATAGTTTTATCAGAGGTGTTTCTGGAGGAGAGAGGAAGAGAGTGAGTATCGGTCACGAGATGCTTGTGAACCCAAGCCTGCTCATCTTAGACGAGCCAACCTCGGGGTTAGACTCGACCGCGGCTCACCGATTGGTCTTGACATTGGGGTCACTAGCTCAAAAGGGTAAGACCATTGTTACGTCTATGCACCAACCGTCTAGCCGGGTCTACCAAATGTTCCACTCTGTGCTAGTTCTTTCTGAAGGGCGGTGTCTCTACTTCGGAAAGGGTTCTGACGCTATGGACTACTTCGCATCAGTTGGCTTCTCTCCATCCTTCCCTATGAATCCAGCGGACTTCTTGCTCGATCTAGCAAACGGAGTGTGTCAACTTGATCATGGTCCAAGTGAAGGAGATAAATCCAACATAAAACAATCACTTGTCTCCTCATACAACAACTTGTTAGGTCCCAAGGTGAAAGCAGCTTGCATGGATGCTGCCAATGTCTCCGCCACCAAAGACGGCATATTTATAGGGAGCAAGAGATACAGCGAGGAGAACAAGAGAACTATCAACAGCAGCAGCAGCAACAGCAGTTGGTTTAACCAATTCACTATTCTCCTTCAAAGAAGCCTAAAAGAGAGAAGACATGAATCATTCAACTCCTTAAGAGTCTTCCAAGTGATAGCAGCAGCATTGTTAGCTGGCTCTATGTGGTGGCACTCAGATATTCGTGACGTTCAAGACCGGTTCGGCCTCCTCTTCTTCTTCGCCATCTTCTGGGGCGTGTTCCCATCTTTCAATTCCTCTTTCGCCTTCCCTCAAGAGCGCGCTATCTTCATCAAGGAACGGTCATCAGGCATGTACACACTTTCCTCATACTTCATGGCGCGAATTGTTGGAGACTTACCCATGGAGCTCATCCTTCCTACAATCTTTCTAACTATAGCATATTGGATGGGTGGATTAAAACCCGAACCGGGTGCGTTCTTATTGACACTAGCAGTGCTTCTTGGGTATGTCATGGTTGCTCAAGGTCTAGGACTTGCACTCGGTGCAGCGATAATGGATGCTAAACAAGCGTCAACGGTGGTCACGGTAACAATGCTCGCGTTCGTTCTCACTGGGGGCTTTTACGTGCATAAAGTGCCGGCTTGCATTGCTTGGATCAAATATACTTCCTTTACCTTCTACTGCTACAAGCTTCTTATCGATATCCAATATGGGGAAGGGAATGCAGTCTCGTCTCTCTTGGGTTGCACCCATCATGGCAGTAATAAACCTAATTGCAGGTTTGTCGAAAGAGATGTGGAAGGACAAGTCTCCGCCATAGTGAGCATTGGCACGTTGGTTTTTATGTTCTTTGGTTACAGATTACTAGCCTATGCGGCTCTGAGGCGCATCAAAACTTGA 2013 0.4724 MAAIAEEETPNGGSSDGSERSHDRQNFDSLISSCYPINLKFIDICYRVKLERKSSGDGGCIGRMFGAAGGPTPTDKRIMMKSMSEERTILSGITGMVSPGEILAILGPSGSGKSTLLNVLAGRLHGNCFTGSVLANNRRLTKSVLRRTGFVTQDDILYPHLTVKETLTFCSLLRLPNTLSKKEKVLVAESVISELGLGKCENTIIGNSFIRGVSGGERKRVSIGHEMLVNPSLLILDEPTSGLDSTAAHRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFHSVLVLSEGRCLYFGKGSDAMDYFASVGFSPSFPMNPADFLLDLANGVCQLDHGPSEGDKSNIKQSLVSSYNNLLGPKVKAACMDAANVSATKDGIFIGSKRYSEENKRTINSSSSNSSWFNQFTILLQRSLKERRHESFNSLRVFQVIAAALLAGSMWWHSDIRDVQDRFGLLFFFAIFWGVFPSFNSSFAFPQERAIFIKERSSGMYTLSSYFMARIVGDLPMELILPTIFLTIAYWMGGLKPEPGAFLLTLAVLLGYVMVAQGLGLALGAAIMDAKQASTVVTVTMLAFVLTGGFYVHKVPACIAWIKYTSFTFYCYKLLIDIQYGEGNAVSSLLGCTHHGSNKPNCRFVERDVEGQVSAIVSIGTLVFMFFGYRLLAYAALRRIKT* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00269 670 SMART AAA_5 99 290 IPR003593 GO:0016887
Eupl03g00269 670 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 313 IPR003439 GO:0005524
Eupl03g00269 670 Pfam ABC-2 type transporter 403 608 IPR013525 GO:0016020|GO:0140359
Eupl03g00269 670 Gene3D - 77 306 IPR027417 -
Eupl03g00269 670 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 661 - -
Eupl03g00269 670 Pfam ABC-2 type transporter 270 333 IPR043926 GO:0140359
Eupl03g00269 670 MobiDBLite consensus disorder prediction 1 23 - -
Eupl03g00269 670 Pfam ABC transporter 91 241 IPR003439 GO:0005524
Eupl03g00269 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 305 IPR027417 -
Eupl03g00269 670 FunFam ABC transporter G family member 22 77 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00269 Eupl-Chr3 8779483 8786696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00269 100 298 Calmodulin-binding Proteins AT2G36910 25.854 1.97e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00269 K05681 - nnu:104596809 986.097