Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00261 ATGGAACAGACGGAGAAACAAAAGAGTAGTAATTCAGAACACCATCACATCCATCATCAACAACAACTACAACAATCTTCTCCTTTGCAACTGGTCCCTTTGGAAGGTCGATCTGGGTCAAGTCCAGGCCCAGGATCGGGCCCATTCATGGGCTCCATCTCCACCCAAGGTGGAGGTGGTGGTGGTGGTGGAGGAGGAGGTAGTTCTTCTGCATCTTCTACTAGTACTACAAGTACAACTACACCACCACAGCAGGTTGATGCTTCCCTTGCAATCTCCACAAAATCTGACTCTCTCCCATCCAATCGATCCGCCTCTCTTGTTGACCCCACCAAGAAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCTAACGATTGCAACAACCACAAAACGTTCATCCAAGGATAGACACACAAAAGTGGACGGTCGAGGACGTCGCATCCGTATGCCGGCCACATGTGCTGCTAGGGTTTTTCAATTGACAAGGGAATTAGGGCACAAATCCGACGGTGAGACTATTGAGTGGCTGTTGCAACAAGCGGAGCCAGCGATCATTGCCGCTACAGGTACCGGCACCATCCCAGCCAATTTCTCCACCCTCAACGTTTCCCTCCGTAGCAGCGGCTCTACCATCTCCGCTCCGCCTTCCAAGTCTATCTCGCATTCTTTCCACGGTGCACTAGCCCTTGCACACCACCCTCACCACTACGATGAGGGCTCTGAGCCAGGTCGAAGGTTAATTACAGGTGTTGATCAGGGAATCTCACATACTGCCATGTTAGGGTTTCATCACCAACATCATCCCCATCTTCTAACAGCAGATCAGATTGGAGAAGCACTTCCCGGTGGCAGTGGTGGTGCTGGTGGTTCCGGTGGAGACTCCGCTGATACCTATTTGAGAAAACGCTTCAGAGAAGACCTTTTCAAAGAGGAGTCTCAGTCGCACCCAAACACGGAAGATGGTAGCGCAACCTCCCCTTCATCTACTAAATCCTCACGATTGCAGAGACAACAACAAGAACAGGCTGCTGCTGCTGCTGCTGCCACAGGTCTAATTCGGCCTTCAAACATCATGCCAGCAGCGGCGATGTGGGCAGTGGCACCAGCGCCGAGTAGCGGCGGCAGTGCATTCTGGATGCTACCCGTCACAGCCGGGTCCACCGCTCCAACAGTGACTACCGCCGCTGGTCCATCAGAACAGCCAGTATGGACCTTCCCCACCGCGGGAGGACAGTATCGTACCACGTCGATTCCGACTGCTACTGGGAACACGCTCCAAGCTCCTTTACATTTCATGCCGAGAATTAACATTTCGGGTGGCCTTGAATTTCAAGGCGGGCGCATGAGTCCGCTCCCACTCGGGTCGATGCTATTGCAACAACCCTCCGCTTCCGCTGCTGCCTCTCAGCATCTCGGCCTTGGAATCTCCGAGACCAACCTGGGCATGTTAGCAGCCCTTAATGCTTATAATCGGGGTGGTTTGAATATGAATATGAATTCTGAGCAACATCATCCACTGGATCATCATCAACAACAACATCATCATCATCATCATCATCAACAACAGCAAGTTCATTCTCATCAGTCTCAAGGCACTGATAGTGGAGATGAACACCCAACCGATTCTCAGTAA 1650 0.52 MEQTEKQKSSNSEHHHIHHQQQLQQSSPLQLVPLEGRSGSSPGPGSGPFMGSISTQGGGGGGGGGGGSSSASSTSTTSTTTPPQQVDASLAISTKSDSLPSNRSASLVDPTKKQQQQQQQQQQQQQQQLTIATTTKRSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTISAPPSKSISHSFHGALALAHHPHHYDEGSEPGRRLITGVDQGISHTAMLGFHHQHHPHLLTADQIGEALPGGSGGAGGSGGDSADTYLRKRFREDLFKEESQSHPNTEDGSATSPSSTKSSRLQRQQQEQAAAAAAATGLIRPSNIMPAAAMWAVAPAPSSGGSAFWMLPVTAGSTAPTVTTAAGPSEQPVWTFPTAGGQYRTTSIPTATGNTLQAPLHFMPRINISGGLEFQGGRMSPLPLGSMLLQQPSASAAASQHLGLGISETNLGMLAALNAYNRGGLNMNMNSEQHHPLDHHQQQHHHHHHHQQQQVHSHQSQGTDSGDEHPTDSQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00261 549 MobiDBLite consensus disorder prediction 1 20 - -
Eupl03g00261 549 ProSiteProfiles TCP domain profile. 139 193 IPR017887 -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 515 529 - -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 315 353 - -
Eupl03g00261 549 Coils Coil 112 132 - -
Eupl03g00261 549 Pfam TCP family transcription factor 138 307 IPR017887 -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 1 152 - -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 282 302 - -
Eupl03g00261 549 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 82 540 IPR005333 GO:0003700
Eupl03g00261 549 MobiDBLite consensus disorder prediction 136 152 - -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 66 135 - -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 323 350 - -
Eupl03g00261 549 MobiDBLite consensus disorder prediction 501 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00261 Eupl-Chr3 8281510 8284451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00261 136 485 TCP Transcription Factor Family AT1G35560 42.090 4.71e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl03g00261 TCP 3.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00261 - - nnu:104596844 638.262