Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00251 ATGGGGGATTTCAGTTACAGAGACATATTAGCCGCAACGGAAGACTTCTCCCTCTCGAATCTGATCGGGAAAGGAAGCCATGGATGTGTTTACAAGGGTGTTCTTAAAGGTGGCAAGCTCGTTGCAGTGAAAAAGGCATCACTCGGTCTTCAAATCCTTCAAGACAGCTCTAAACTTGATAACGAGATTGAGATTCTATCGTCTCTACAGAAAAGCCCGTACCTAGTGAACCTGGTTGGAGTGAGTCATGACTCGTCAACTCAGAAGAAGCTCCTCGTCATGGAATTCATGCCTAATGGTTCCCTTCATGAATTGCTCCATAACATTTCCGTCCCACCAAACTGGTCTAATCGTGCACTTATTGCTCTCCAGATAGCTCAGGCGATTCAATTCCTTCACGTCTCTAAACCGTCGATCATTCATAGAGATATCAAGTCTGCAAATATTCTGTTTGATTCTAACTGGAATCCTAAGTTAGCAGATTTTGGCCTAGCAGTTCGACATAACGATCTTGACTCGTTCATCATATCTCTGACTCAACCCGCTGGTACAATCGGTTACTTAGACCCTTGTTACACTACGCCGGGGAAGCTTAGTACCAAGAACGATGTCTTCAGCTTCGGAGTCGTCCTGCTAGAAATCATTAGTTGTAGACAAGCTATCGATGTTGGAATGGAACCTGCTTCTATTGTCGAATGGGCAGTGCCGTTAATCAACGATGATCGATTATTCGAGGTTTGCGATGCAAGGGTTACGTTGTCAACGAACATGGAAGGTGCTATCCGACGAATGCTTAACATCGCTGCTCGTTGTGTTTCATCGAAGGAGGAGTGCCGTCCATCGATGGAAGAGATAGTTACCGAGTTGAAAAACTGTGTGGTGGAACGAGTTCGATTATTCCGAGTCTGGAGGAACCTTCTTAGGAGTAGTCTCATGAGAAGGCGAAGAAAATCGTCGACTACCACCATAAGGTGCACAACACATGAAGCAGATATTTCAAGAGGGAAGCTGTCAGTAAGAGAGGTTTTGGCTGACTCGAGCCTGAAGTGA 1050 0.4533 MGDFSYRDILAATEDFSLSNLIGKGSHGCVYKGVLKGGKLVAVKKASLGLQILQDSSKLDNEIEILSSLQKSPYLVNLVGVSHDSSTQKKLLVMEFMPNGSLHELLHNISVPPNWSNRALIALQIAQAIQFLHVSKPSIIHRDIKSANILFDSNWNPKLADFGLAVRHNDLDSFIISLTQPAGTIGYLDPCYTTPGKLSTKNDVFSFGVVLLEIISCRQAIDVGMEPASIVEWAVPLINDDRLFEVCDARVTLSTNMEGAIRRMLNIAARCVSSKEECRPSMEEIVTELKNCVVERVRLFRVWRNLLRSSLMRRRRKSSTTTIRCTTHEADISRGKLSVREVLADSSLK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00251 349 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Eupl03g00251 349 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Eupl03g00251 349 PANTHER OS01G0253100 PROTEIN 3 293 - -
Eupl03g00251 349 SMART serkin_6 16 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00251 349 FunFam Serine/threonine-protein kinase-like protein At5g23170 97 299 - -
Eupl03g00251 349 Pfam Protein kinase domain 18 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00251 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Eupl03g00251 349 ProSiteProfiles Protein kinase domain profile. 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00251 349 Gene3D Transferase(Phosphotransferase) domain 1 97 300 - -
Eupl03g00251 349 PIRSF ILK 5 310 - -
Eupl03g00251 349 SUPERFAMILY Protein kinase-like (PK-like) 4 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00251 Eupl-Chr3 7946289 7947747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00251 4 295 Receptor kinase-like Gene Family AT3G59420 40.741 1.27e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Eupl03g00251 Pkinase 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00251 - - tss:122653722 443.351