Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00241 ATGGCTTCCACAACGGCTCCTCCGACCTTGTCACTCCTGCTTGGGGGCCGAAGGGGTTCGGAGGAGGTCCAAAGAAGAAGAAGGCGTCGTAGTGTTGGTGTTTTTGCATCCGAAGGTTCGGGGGGCCGGGGAGGAAAGGCTCCACCCGGAGTTGATACCAGGATTCACTGGGACAATCCGGACGATGGATGGCTCGGGGGGAGCAATTCATCGACGCCGGAAAAACCAAAAGTTGAGGAGAAGCAACAGAGTCTTTTAGGAGAGAAGTTCGCCGATTTGCTCAATTCCACTGATTCTCATTACCAGTTCTTAGGAGTATCTGCTGAGGCAGACTTGGAAGAGATCAAAGCCGCTTACAGACGGCTATCAAAGGAGTACCATCCCGACACAACGTCGCTTCCTTTAAAAGCTGCATCGGATAAATTCATGAAACTAAGAGAAGTCTACGACATCTTAAGTAATGAAAAGAGTCGGCAGTTCTACGACTGGACCTTGGCTCAGGAGGCGGCGAGCCGCCAAGCGGAGAAAATGAAGATGAAGTTGGAGGATCCTTACGAGCAAGACCTGAAAAACTGGGAGTCGATACCGGATATGGTTGATCGGCTCGGTGGGAGGAACTTGGAGCTAAGTGATCAAGCCATGTCGGCCCTCACCATCGATGTTGCCATTATAATCTTCGCGACTTGTTGTATCATTTACGTTCTCTTCTTTAAGGAACCATACTACTAG 729 0.5021 MASTTAPPTLSLLLGGRRGSEEVQRRRRRRSVGVFASEGSGGRGGKAPPGVDTRIHWDNPDDGWLGGSNSSTPEKPKVEEKQQSLLGEKFADLLNSTDSHYQFLGVSAEADLEEIKAAYRRLSKEYHPDTTSLPLKAASDKFMKLREVYDILSNEKSRQFYDWTLAQEAASRQAEKMKMKLEDPYEQDLKNWESIPDMVDRLGGRNLELSDQAMSALTIDVAIIIFATCCIIYVLFFKEPYY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00241 242 Coils Coil 105 125 - -
Eupl03g00241 242 MobiDBLite consensus disorder prediction 1 79 - -
Eupl03g00241 242 SMART dnaj_3 98 157 IPR001623 -
Eupl03g00241 242 PRINTS DnaJ domain signature 101 119 IPR001623 -
Eupl03g00241 242 PRINTS DnaJ domain signature 119 134 IPR001623 -
Eupl03g00241 242 PRINTS DnaJ domain signature 137 157 IPR001623 -
Eupl03g00241 242 FunFam DnaJ homolog subfamily C member 4 89 186 - -
Eupl03g00241 242 ProSiteProfiles dnaJ domain profile. 99 165 IPR001623 -
Eupl03g00241 242 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 241 IPR044618 -
Eupl03g00241 242 Pfam DnaJ domain 100 162 IPR001623 -
Eupl03g00241 242 SUPERFAMILY Chaperone J-domain 95 165 IPR036869 -
Eupl03g00241 242 MobiDBLite consensus disorder prediction 19 33 - -
Eupl03g00241 242 Coils Coil 135 155 - -
Eupl03g00241 242 CDD DnaJ 100 154 IPR001623 -
Eupl03g00241 242 Gene3D DnaJ domain 88 186 IPR036869 -
Eupl03g00241 242 ProSitePatterns Nt-dnaJ domain signature. 142 161 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00241 Eupl-Chr3 7693157 7694895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00241 100 167 C2H2 Transcription Factor Family AT1G74250 37.500 1.07e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00241 K23051 - nnu:104589413 343.969