Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00239 ATGAACCAAAGAAAACCCAGTTTTGAAGGTTTCATCTACATATTGTTCTTGTTCAGGCTTCTCCAAGGCAGTCTCTCTCCTGCTGATGCGTATGATCCATTGGATCCTAATGGGAACATCACCATCAAATGGGATATCTTAACGTGGCATGACGATTCCTACGATGTAAAGGTATCAATATTCAATTTCCAATTGTTCCGACACGTGGAGAGACCGGGTTGGAGATTGAATTGGGACTGGCAAGGACATGAGGTGATATGGGGAATGCTAGGTGCAGAGGCCACTGAGCAAGGAAACTGTTCTAGGTTCAAAGGGAAGATCCTCCCACATTCGTGCATGAAGAAGCCAGTGATTGTTGATTTTCTACCTGGAGCGCCTTACAACATGCAGGTTTCCAATTGCTGCAAGGGAGGTGTATTATCATCTATGACGCAGGATCCTACCAAGTATGGAGCCTCTTTTCAAATGGACGTTGGGAATGCTCCTGTAGACAATCGAACTGACCTGATAATGCCCCAAAACTTCAGCCTTGGACTTCCAGGCTACACCTGTGGGGACCCATTTATGGTCCCACCTAGCAGATTCGATATGGATAAGGGCCGTCGATGGACACAAGCTCTCATGACATGGAATGTAACGTGTTCTTACTCCCAATTCAAGGCATCAACAGCCCCCACTTGCTGTGTTTCCTTGTCTGCCTTCTACAATGAAACCATTATCCCATGCCCCCATTGCAGCTGTGCCTGCCAAGTTGATCCAGGACCAGAATGTGTCAAGTCGGGTGAGTCACCGCATAAGTCGCGGCTACCGCATAACGAAGAGGAAGTGGTGCCACCTGTCTTGATGTGTTCACGACACATGTGCCCGATTCGGGTGCATTGGCATGTGAAGGTGAGTTATAAGGAGTATTGGAGGGTTAAGATGACAGTGACCAACTTAAACTTTGCTAAGAACTACACACAATGGAGCTTGGTGGTGCAGCACCCCAATTTGCAAAGTGTAGTCGAGGTCTTCAGCTTTAACTACAAGTCTCTGAACCAGTATGGGCCCATCAATGATACTGGAATGTTCTGGGGGATTCAACACTACAATGACTTGTTACTCAATTCGGGCGAGAGCGGGAACGTACAGACGGAAATGTTACTTCGAAAAGAAGCAGGAATTTTTACCTTCAGGGAAGGATGGGTTTTCCCCAGGAAAATATCGTTCAATGGAGAAGAGTGCGTAATGCCCCTTCCAGATAAGTACCCTAGGCTTCCCAACGGCAGCAACATATCACATGCCCTTGCAGGACGACCTTATATCTTTACTGTATTTTTCTTGTTGCTTGCAATGGTGTTGCTACATTAA 1350 0.4659 MNQRKPSFEGFIYILFLFRLLQGSLSPADAYDPLDPNGNITIKWDILTWHDDSYDVKVSIFNFQLFRHVERPGWRLNWDWQGHEVIWGMLGAEATEQGNCSRFKGKILPHSCMKKPVIVDFLPGAPYNMQVSNCCKGGVLSSMTQDPTKYGASFQMDVGNAPVDNRTDLIMPQNFSLGLPGYTCGDPFMVPPSRFDMDKGRRWTQALMTWNVTCSYSQFKASTAPTCCVSLSAFYNETIIPCPHCSCACQVDPGPECVKSGESPHKSRLPHNEEEVVPPVLMCSRHMCPIRVHWHVKVSYKEYWRVKMTVTNLNFAKNYTQWSLVVQHPNLQSVVEVFSFNYKSLNQYGPINDTGMFWGIQHYNDLLLNSGESGNVQTEMLLRKEAGIFTFREGWVFPRKISFNGEECVMPLPDKYPRLPNGSNISHALAGRPYIFTVFFLLLAMVLLH* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00239 449 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215|GO:0016020
Eupl03g00239 449 PIRSF COBRA 8 448 IPR006918 GO:0010215|GO:0016020
Eupl03g00239 449 PANTHER PROTEIN COBRA 22 427 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00239 Eupl-Chr3 7609887 7617455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00239 8 449 COBRA Gene Family AT3G02210 54.260 1.12e-178 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00239 - - mof:131163588 633.639