Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00233 ATGGCTGGTGCCTCGAACCATGTGCAAGGAAGTGTGGGGAAGGGGATTGAGGCTGCTGAGAGGATCATGTTCTTGCACGGTGATTTGGATTTGTGGATTTTGGAAGCAAGATCTCTTCCTAATATGGATTTAGTTTCTGAGAGAATGAGAAGATTTTTTACTATGTTCGGGGTTTGTACATCTCCTTTCAAGAGAAAAAATAAGCATAAGGGTGGGCATAACATTATTACTAGTGATCCTTACGTGTCCGTGTGCTTGGCAGGGGCAACAGTAGCTCAAACCAGAGTAATTGCCAATTGTGAGAACCCATCATGGGATGAGCATTTCTGTGTACAAGTTGCTCACCCAGTTGCAAAAGTGGAGTTTCAGGTTAAGGATAACGATGTTCTTGGGGCCCAGCTTATTGGAGTAGTGGGGATATCTGTAGAGAAAATCCTATCTGGAAATACAATAGATGGTTGGTTCCCTGTGGTTGGTCCTTATGGTAATCCCTTGAAACCCTATCCTGAATTACATCTTTCTTTGAAATTTAGGCCTGTCGAAGACAATCCTTTGTATAAAGATGGTGTTGGTGCCGGCCCGGATTACTCGGGAGTGCCTAAAACATACTTTCCACTTCGCAAAGGAGGGAGTGTGAACCTCTATCAAGATGCACATGTACCAGATAAAATGCTACCTGAGATCCTACTAGATGGGGGAAAGGTTTTTCAGCAAGGTAAGTGTTGGGAAGACATCTGTCATGCCATATTGGAAGCTCACCATCTGATTTATATCATTGGGTGGTCGATATACCACCCCGTAAAGCTTGTAAGAGAGCCAACAAAGCCATTGCCAAACGGAGGAGAGCTGTCCCTTGGGGAATTGTTGAAGTTCAAATCGCAAGAAGGAGTCCGTGTGATCATGCTGATTTGGGACGATAAAACCTCGCACAACAATTTTCTTTTGAAAACAGAAGGTGTCATGCAAACTCATGATGAAGAAACTCGAAAGTTTTTCAAGCACTCAAGTGTCCATTGTGTGCTGTCTCCTCGTTATGCCAGCAATAAGCTTAGTATTTTTAAGCAACAGGTTGTTGGAACACTCTTTACTCACCACCAGAAGTGTATTCTACTTGACACCCAAGCTTCTGGAAATAACCGAAAAATAACTGCTTTCATTGGTGGCCTGGATCTATGTGATGGACGATATGACACTCCTGAACACCGGCTCTTTGGCGATCTTGACAGTGTCTTCGAAAAAGATTTTCACAATCCTACATTTCCTTCCCGGGCCCGAGGCCCAAGAGAACCGTGGCATGATTTACACTGCAAAATTGAGGGTCCCGCTGCATATGACATACTGAAAAATTTTGAGCAAAGATGGAGAAAAGCTACAAAATGGAGAGATTTCAGGATAAAAAAGGTCACACACTGGCATGATGATGCCTTGATAAAGCTAGACCGTATTTCATGGATACTCACTCCTGCTCCTGATGATGATCATAATGTACGTGTTTTCGAAGAAGAAGATCCTGAGAATTGGCATGTGCAGATATTTCGGTCAATCGATTCAGGGTCAGTAAAGGGATTCCCAAAAGTTATTCAGGAAGCTGAGGCACAGAATCTCATCTGTGGAAAGAACTTGAAAATTGACAAGAGCATACATGTTGCATATGTGAAAGCAATAAGATCGGCCCAACATTTTATATACATAGAGAACCAGTATTTCCTTGGATCTTCTTATTACTGGCCATCATACAAAAATGCAGGCGCTGATAATTTAGTGCCAATGGAATTGGCCTTGAAAATTGCTAGCAAAATCATTGCGAATGAACGTTTCTCAGTGTATATAGTAATCCCAATGTGGCCTGAAGGTGTACCAACTAGTGCTTCCGTGCAGGAAATTCTATTTTGGCAGGGGCAAACAATGGATATGATGTATGGGATTATTGTACAAGCACTTGAAAAAGCAGGTCTTTCTAATGAATGTCATCCTCAAGACTACTTGAATTTTTATTGTCTTGGTAAGCGTGAAGCTGGTCCTGAAGAAAGATCATCAGCAACATGTCAAACATCTGAAGCATTGAGATTAGCTCAGAAGTTTCGTAGATTTATGATTTACGTCCATGCCAAAGGGATGATAGTGGATGACGAATATGTAATCATGGGATCTGCAAACATTAACCAGAGATCTTTGGATGGTTCAAGAGACACGGAAATTGCTATGGGAGCGTATCAACCAAATTATAAATGGGCAGGAAAGAAGAGTCATCCACGTGGCCAGGTTTATGGCTATCGGATGTCTCTCTGGGCTGAGCATCTTGGCTCCCTTGAAGATTCTTTCCATGAACCGCACACAATTGAGTGCGTTAGGCGTGTGAACAAGCTAGCAGAAAGAAATTGGCAGTCATTTGTGTCCGAGAAGAACAAAGAGATGAAGGGACACTTGTTGAGATACCCAATACAAGTGAGCATAGATGGAAAGATCGGGCCATTGCCTGGATATGAATGCTTTCCTGATGTGGGTGGTAAGATTCTTGGAGCACCCAACACTCTTCCCGATGCTTTAACCACATAA 2556 0.4261 MAGASNHVQGSVGKGIEAAERIMFLHGDLDLWILEARSLPNMDLVSERMRRFFTMFGVCTSPFKRKNKHKGGHNIITSDPYVSVCLAGATVAQTRVIANCENPSWDEHFCVQVAHPVAKVEFQVKDNDVLGAQLIGVVGISVEKILSGNTIDGWFPVVGPYGNPLKPYPELHLSLKFRPVEDNPLYKDGVGAGPDYSGVPKTYFPLRKGGSVNLYQDAHVPDKMLPEILLDGGKVFQQGKCWEDICHAILEAHHLIYIIGWSIYHPVKLVREPTKPLPNGGELSLGELLKFKSQEGVRVIMLIWDDKTSHNNFLLKTEGVMQTHDEETRKFFKHSSVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCILLDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFGDLDSVFEKDFHNPTFPSRARGPREPWHDLHCKIEGPAAYDILKNFEQRWRKATKWRDFRIKKVTHWHDDALIKLDRISWILTPAPDDDHNVRVFEEEDPENWHVQIFRSIDSGSVKGFPKVIQEAEAQNLICGKNLKIDKSIHVAYVKAIRSAQHFIYIENQYFLGSSYYWPSYKNAGADNLVPMELALKIASKIIANERFSVYIVIPMWPEGVPTSASVQEILFWQGQTMDMMYGIIVQALEKAGLSNECHPQDYLNFYCLGKREAGPEERSSATCQTSEALRLAQKFRRFMIYVHAKGMIVDDEYVIMGSANINQRSLDGSRDTEIAMGAYQPNYKWAGKKSHPRGQVYGYRMSLWAEHLGSLEDSFHEPHTIECVRRVNKLAERNWQSFVSEKNKEMKGHLLRYPIQVSIDGKIGPLPGYECFPDVGGKILGAPNTLPDALTT* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00233 851 SMART pld_4 360 395 IPR001736 GO:0003824
Eupl03g00233 851 SMART pld_4 697 724 IPR001736 GO:0003824
Eupl03g00233 851 FunFam Phospholipase D delta 232 475 - -
Eupl03g00233 851 SMART C2_3c 28 154 IPR000008 -
Eupl03g00233 851 Pfam C2 domain 27 157 IPR000008 -
Eupl03g00233 851 Gene3D C2 domain 25 187 IPR035892 -
Eupl03g00233 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Eupl03g00233 851 SUPERFAMILY Phospholipase D/nuclease 197 464 - -
Eupl03g00233 851 SUPERFAMILY Phospholipase D/nuclease 523 777 - -
Eupl03g00233 851 Pfam Phospholipase D C terminal 771 841 IPR024632 -
Eupl03g00233 851 CDD C2_plant_PLD 23 178 - -
Eupl03g00233 851 PIRSF PLD_plant 15 851 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Eupl03g00233 851 Gene3D Endonuclease Chain A 234 475 - -
Eupl03g00233 851 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 697 724 IPR001736 GO:0003824
Eupl03g00233 851 Gene3D Endonuclease Chain A 519 742 - -
Eupl03g00233 851 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 180 IPR035892 -
Eupl03g00233 851 PANTHER PHOSPHOLIPASE D 19 840 IPR015679 -
Eupl03g00233 851 Pfam PLD-like domain 552 733 IPR025202 -
Eupl03g00233 851 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Eupl03g00233 851 ProSiteProfiles C2 domain profile. 8 155 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00233 Eupl-Chr3 7435235 7483225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00233 13 850 Phospholipase D Gene Family (Wang group) AT2G42010 55.709 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00233 K01115 - ming:122082652 1476.46