Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00215 ATGGAGAAGTACGAGCTTGTGAGGGATATCGGATCTGGAAACTTTGGCGTGGCGAGGCTTATGAGGAACAAGGAAACGAAAGAGCTCGTCGCCATGAAATATATCGAGCGAGGACATAAGATCGACGAGAATGTGGCTAGAGAGATCATGAACCACAGATCGCTTCGGCATCCCAACATAATCCGATTCAAGGAGGTCGTTTTGACTCCCACTCATCTCGCCATCGTCATGGAGTTCGCCGCAGGCGGAGAGCTCTTCGAGCGAATCTGCACCGCCGGAAGATTCAGTGAAGACGAGGCGAGATATTTCTTCCAGCAGCTTATCTCAGGCGTCAGCTACTGTCATTCCATGCAAATCTGCCACCGAGATTTGAAGCTTGAGAACACGCTTTTGGACGGAAGCCCTGCGCCACGCCTGAAAATCTGCGATTTCGGTTACTCGAAGTCGTCTCTGCTGCATTCAAGACCTAAATCGACGGTGGGAACCCCAGCATACATCGCGCCAGAGGTACTTTCTCGGCGAGAATACGACGGCAAGTTGGCAGACGTCTGGTCATGTGGAGTAACTCTCTATGTTATGCTGGTGGGAGCATACCCTTTTGAAGACCAAGAAGACCCCAAAAATTTCAGGAAAACCATCACACGAATAATGGCTGTTCAATATAAAATCCCCGACTATGTTCACATATCACAAGATTGCAAGCAACTCCTTTCTCGCATATTTGTTGCAAATTCGTCCAGGAGGATTACAATCAAAGAAATCAAGAGCCACCCATGGTTCTTGAAGAACTTGCCAAGGGAACTAACAGAGCCTGCCCAAGCAATCTACTATCAGAGAGACAACCCAAGCTTTTCCCTCCAGAGTGTAGATGACATAATGAAAATTGTTGGGGAGGCAAGAACCCCTCCTCCATCATCAAGGTCTGTTGGAGGCTTTGGCTGGGTAGGGGAAGAAGATGAAGGGGAAGGCAAGGAAGAAGATGGAGATGGAGATGAAGATGAAGAGGAGGAGGAAGACGAAGACGAGTACGAGAAGAGGGTTAAGGAAGTGCATGCAAGTGGTGAGTTTCATGTCATTTAA 1080 0.4833 MEKYELVRDIGSGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIMNHRSLRHPNIIRFKEVVLTPTHLAIVMEFAAGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTITRIMAVQYKIPDYVHISQDCKQLLSRIFVANSSRRITIKEIKSHPWFLKNLPRELTEPAQAIYYQRDNPSFSLQSVDDIMKIVGEARTPPPSSRSVGGFGWVGEEDEGEGKEEDGDGDEDEEEEEDEDEYEKRVKEVHASGEFHVI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00215 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Eupl03g00215 359 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Eupl03g00215 359 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Eupl03g00215 359 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Eupl03g00215 359 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00215 359 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Eupl03g00215 359 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00215 359 MobiDBLite consensus disorder prediction 319 343 - -
Eupl03g00215 359 MobiDBLite consensus disorder prediction 297 359 - -
Eupl03g00215 359 PANTHER SERINE/THREONINE KINASE 2 300 - -
Eupl03g00215 359 CDD STKc_SnRK2 3 259 - -
Eupl03g00215 359 MobiDBLite consensus disorder prediction 344 359 - -
Eupl03g00215 359 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Eupl03g00215 359 SUPERFAMILY Protein kinase-like (PK-like) 1 303 IPR011009 -
Eupl03g00215 359 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00215 Eupl-Chr3 6893480 6905266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00215 3 291 CBL-interacting serine-threonine protein kinases AT4G24400 42.282 2.49e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Eupl03g00215 Pkinase 3.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00215 K14498 - msin:131234507 636.721