Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00205 ATGGAGAGGCCTCCGGAGAACGACTTCTGCTCCGTGTGCCATGACAACTTCGACCTTCCTTGCCAGGCCAACTGTTCTCACTGGTTCTGCGGTAATTGTATTCTGCGTGTTTGGCATCATAGCTCGGCACTTCAGCCATGTAAATGCCCTATATGTCGCCGTTTCATAACTTTGTTGATACCTTCTGATGCATCGTCACAACACCGAAATGACCCAGAAGTTTGTCAGGTTCTAGAAAATATTGAAAGATATAATCGTCTATTTGGTGGAGGCGCACATGGTCTCATTCAGAGATTACGAGACCTGCCATTTTTTCTACGGAGGTTGTTACGGGAACTGATGGATCCTCAAAGATCTCTTCCTCTTATTTTTAGGGCGCGCATGATTTTTGCAATGGTACTAAGCGCGATCTACGTACTCAGCCCCATAGACATTATACCTGAAGGAATCCTGGGAGTAGTAGGTTTTTTGGATGATCTCCTCATAGTGCTAATCTTTTTCCTCCATGTTGCTGCCATGTATCGCTCAGCACTTCTTTTTCGACATGGAGGTACTTGA 558 0.4534 MERPPENDFCSVCHDNFDLPCQANCSHWFCGNCILRVWHHSSALQPCKCPICRRFITLLIPSDASSQHRNDPEVCQVLENIERYNRLFGGGAHGLIQRLRDLPFFLRRLLRELMDPQRSLPLIFRARMIFAMVLSAIYVLSPIDIIPEGILGVVGFLDDLLIVLIFFLHVAAMYRSALLFRHGGT* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00205 185 SUPERFAMILY RING/U-box 6 59 - -
Eupl03g00205 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Eupl03g00205 185 CDD RING-HC_RNF113A_B 4 61 - -
Eupl03g00205 185 Pfam Protein of unknown function (DUF1232) 129 164 IPR010652 -
Eupl03g00205 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Eupl03g00205 185 PANTHER UNCHARACTERIZED 2 179 IPR038896 GO:0061630
Eupl03g00205 185 SMART ring_2 10 52 IPR001841 -
Eupl03g00205 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 87 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00205 37 185 C3H Transcription Factor Family AT1G72175 67.785 7.73e-62 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00205 K15707 - nnu:104590756 298.13