Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00188 ATGCGTCTTGCCCTAAAGTTTAAAACCTTGGGTGATGCGTCTTGCCCTAAAGTTTTCTTCTACGCTGCTGCCGCGAAACAGAGAGTTCCTATAATGAGCAGGCGATTGAGAGCTTTCAAACGTTGGATGAAGTCCCAGGGGATTGAATGCAGCGATGGTCTCAAATTAACGGACGGTGGTGATGAAGGGATCTCGGTGAAAGCCGTCTGCGATTTAAGGGAAGGAGATCTTGTGGCGACCATACCGAAGCATGCTTGCCTCACTATCAAGACGTCGGCGGCTCAGGAGATGATTGAAAGCGCAGGATTGGGGGGCTCATTGGCCCTTTCGGTGGCCCTGATGTACGAGAAAAGTTTAGGGGAGGCGTCGGTCTGGGCCGGGTATCTCCAGCTTTTGCCCGACAGAGAATGCATGCCCTTGGTCTGGACTTTGGACGAAGTCGATACTCTCCTAGCCGGGACTGAACTCCACAAGATAGTAAAAGAAGACAAGTCTCTAATTTATGAGGACTGGAAAGAGTCTATCCTGCCCCTTATAGCTGCTGGACCATTGAAGCTCAACCCAAAGAGCTTTGGTGTTGAGCAATACTTTGCTGCGAAAAGTCTTGTTGCTTCTCGATCCTTTGGGATAGACGAATATCATGGATCTGGGATGGTTCCCTTGGCAGATCTCTTGAATCACAAGACAGGAGCTGAGAACGTTCACTTTACATCTGTATCTTCCTCTTCGGACTCTGACAACGACAATGATGCTGAGGACAACTTCAATGAGTTTCAGAATTATTGTTATGATAAACCATCAACAGAAGATCTTCACTCCATGATGAATGGGTCTTCGACTGCTCTTGCCGGAAAGTATTATTTGAATAGTAGCAAAGTGGATTTCTCTTCAAATTTGGGGAATGATCCGGTGGCTCTAGAAATGATAATTGTGAGGGATGTCAAAGCTGGGGAAGAGGTTTTTAATACTTATGGGTCCATGGGGAATGCTGCATTGCTTCATAGATATGGATTTACAGAGCCTGATAATCCTTTCGACATTGTGAATATCGATCTAAACCTGGTACTCGAATGGAGTTCATCATTGTTCTCCAGCCGTTACAGTAGGGCAAGGCTGTCACTCTGGAGGAGATTAGATAGCTCGGGGTGTGTCAGCCAGAATTCTGAGTATTTCGAAATCTCATCAGACGGGGAACCTCAGCTTGAGCTCTTGATTCTACTCTACATCATTTTCTTACCTGAGGAAGCATATCATAAGCTAAATGAAACTGTACCGTCTATCAGGAACATCAACAAAGCCTTGAGCATTCTTTTGTCGGATAAAAACAATACAAGAATTCCACTAGAAACTCCAGAAATGACCAAGGACTTGTTGCTGACTGACAGCGTTTGTGGTGCGCTTGTGTCAATTGCAGATATTCGGGAAACTTTCTACGGTTTGAACTCAGTGGATGATGATATAGAGGCACTGGGGAGCTGTTGTCACATTCAAGAGAGGAAGTTGTACCATTCATTGGTGTTGCGTGTTAGCGAGAGGAGGATCCTGGAGAAACTAAGAACCTATGCTTCTTCAAGATCATGTAGACCTAAGAAATAG 1596 0.4536 MRLALKFKTLGDASCPKVFFYAAAAKQRVPIMSRRLRAFKRWMKSQGIECSDGLKLTDGGDEGISVKAVCDLREGDLVATIPKHACLTIKTSAAQEMIESAGLGGSLALSVALMYEKSLGEASVWAGYLQLLPDRECMPLVWTLDEVDTLLAGTELHKIVKEDKSLIYEDWKESILPLIAAGPLKLNPKSFGVEQYFAAKSLVASRSFGIDEYHGSGMVPLADLLNHKTGAENVHFTSVSSSSDSDNDNDAEDNFNEFQNYCYDKPSTEDLHSMMNGSSTALAGKYYLNSSKVDFSSNLGNDPVALEMIIVRDVKAGEEVFNTYGSMGNAALLHRYGFTEPDNPFDIVNIDLNLVLEWSSSLFSSRYSRARLSLWRRLDSSGCVSQNSEYFEISSDGEPQLELLILLYIIFLPEEAYHKLNETVPSIRNINKALSILLSDKNNTRIPLETPEMTKDLLLTDSVCGALVSIADIRETFYGLNSVDDDIEALGSCCHIQERKLYHSLVLRVSERRILEKLRTYASSRSCRPKK* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00188 531 Pfam SET domain 63 325 IPR001214 GO:0005515
Eupl03g00188 531 PIRSF RMS1_SET 22 526 IPR011383 GO:0016279|GO:0018026
Eupl03g00188 531 Gene3D set domain protein methyltransferase, domain 1 32 338 - -
Eupl03g00188 531 ProSiteProfiles SET domain profile. 46 325 IPR001214 GO:0005515
Eupl03g00188 531 SUPERFAMILY SET domain 32 343 IPR046341 -
Eupl03g00188 531 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 34 438 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00188 33 526 NAC Transcription Factor Family AT3G56570 56.335 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl03g00188 SET 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00188 - K05302 nnu:104589235 662.144