Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00179 ATGGCGAAAATCCCTCTACCTCTTTCCCTCCATTTCTTCTTAACTACTTTTTATTTATTTCTTCTCCCTTTCCCGCCCTCAACGGCTCTAACGGTCGAAACCCAAGCCCTCCTCGAATTTAAAAAACAGTTGAAAGACCCTTTAAATTCCATGGAAAGCTGGACAGCAGACTCTGAACAGTCTCCTTGTGACTTCGCTGGAGTCTCTTGTGATCCGATTTCTCGCGACGTCACCGGTATCTCCCTTGAAAACAAATCCCTTTCTGGAGAGATATCGCCTTCAATCTCTGTTCTCAAGAATCTAAGTTCTCTTGTACTGGCATCGAATTCTATTTCTGGTGATCTTCCTTTCGGGTTGAGTAATTGCAAGAATCTTCAAATTCTCAATCTCACGCTGAATAATTTAAGTGGCAGCCTACCCGATTTTTCGGCTTTGAAAAATTTGCAGGTTCTCGACTTGTCGGAAAACTACTTTTCTGGTCGGTTCCCTGATTGGGTGGGAAATTTAACGGGATTGACTTCATTGGCCCTTGCCCTGAATAACTTCGATGAGGGTGAAATTCCTGAAAGTCTTGGAAATTTGAAGAGCCTGACATTCATTTATTTGGCTGGTTGTAATTTTAGTGGTGAGATCCCAGAATCTATTTTCGATCTGAAATCCCTGCAATCATTAGATTTTTCTACCAACAATATCTCAGGAAATCTCCCAAAGGCAATCTCAAATTTGCGGAATCTCAACAAGATCGAGCTCTATAAGAACAAGCTCACTGGAGAAATCCCACCAGAGCTTGCAAACCTCACCCTTCTGCGTGAAATTGACATTTCTAACAACCAAATGTCTGGGAAATTGCCTACTGAGATCGGTAATCTGAAGAATCTGGTGGTTTTTCAGTTGTTTAATAACTACTTCTCAGGAGAACTCCCTGAAGGCTTTGGGGATTTGCAATATCTTGTGGGCTTCGCTATCTACGGAAATAATTTTTCCGGAGAATTTCCAGCCAATTTGGGCAGGTTCTCGCCGCTGAACAGTATAGACATATCTGAGAATGAGTTTTCAGGTGGGTTCCCTAGGTTCTTATGTGAGAACAAAAAATTGCAGTTCTTACTTGCTTTGGATAACAATTTTTCCGGTGAACTCCCAGAATCCTATGCTGACTGTAAGTCTTTGGCGAGGTTCAGGATCAATAAAAACCGCTTGTCCGGGAAGATTTCAAATGGGATGTGGGGACTGCCTTATGCAAAGATTATAGACTTTGGTGATAATGGCTTTAGTGGAGGAATATCCTCAGATATAGGGATCTCTACAAGCTTGAATCAGTTGAGTTTGCAGAACAATAAGTTTTCAGGTGAGCTTCCCTCAGAACTTGGCAAGCTTTCCCAGTTAGAGAAACTTATTGCAAATAACAATGCCATTTCTGGTAAAATACCTTCTCAAATTGGAAATCTGAAGCAGTTATCGTCTTTGCATTTGGAAGAGAACTCATTAGCAGGATCAATACCATCAGAACTTGGTGAATGTACAAGATTGGTAGACTTGAATCTTGCTGGAAATTCTCTTAGTGGTGATATTCCCGAAACATTTGCACTGTTGAGCTCTTTAAACTCCTTGAATCTGTCACAAAACAGGCTTTCTGGTTCGATTCCAGAGAATGTACAGAAATTGAAGCTAAGTTCCATTGATTTTTCTGAAAACCAGTTAACGGGAAGGGTTCCGACTGGCCTAGTGATTGTGGGTGGAGACCAGGCATTTTCTGGCAATACAGAACTCTGTATCGACCAAAAATTAGCAAACCAAATAAATTCTGGAATGGGTGTTTGCAGTGGAAATCATAGTCACAAAAAGGTTATTGAAAATAAACTGTTTTTGGTCTGCATCATATCGTCAGCCTTGATTGTTATTTTAGCTGGCTTATTGCTTGTGAGTTACAGGAATTTCAAGTTCAATGAAGCTTATATGGAAGACGATCTGAAAGAGGGGCAGAAAAAATATCCGTCCTGGAAGCTTGAATCTTTCCACCAAAAGGAACTTGATGCAGATGAAATATGTAACTTGGAGGAGGAGAATCTGATTGGAAGCGGAAGTTCAGGAAAAGTTTATCGATTGGATTTGAAGAAGAATGGGGGAACTGTTGCTGTAAAGAAACTATGGAAAGGGAAGGAGGTGAAAGTTTTCACAGCAGAAATTGAGATTCTCGGGAAGATCAGGCATAAAAATATACTGAAGCTTTATGCCTGCTTGATGAGAGGGGGTTCAAATTTCTTGGTTCTTGAGTACATGGAAAATGGAAATCTGTCTCAAGCTCTTCGCCGCCAAATCAAGGGTGGGAAGCCAGAATTGGATTGGACTCAACGGTATAAAATTGCTGTGGGAGCTGCAAAGGGAATTGCATATCTTCACCATGATTGTTCACCAGCTGTTATTCACAGAGATATAAAATCAACCAACATTTTACTTGATGGGGATTATGAACCGAAGATTGCTGATTTTGGAGTTGCAAGGATTGCAGAAGAGTCTGCTGGAGGGTTGGAAATGAGCTGTTTTGCTGGCACTCATGGTTACATTGCTCCTGAACTTGCATATTCTCTTAAAGTAAGTGAAAAGAGCGATGTGTATAGTTTCGGTGTTGTCCTATTAGAATTACTATCTGGTAGAAGTCCAGTCGAACCCGAGTACGGTGAAGGAAAAGATATTGTTTATTGGGTTTCAACTCATCTCAATTGCCGGGAAGATATCATTGAAGTTCTCGACCGGAGGGTGTCAGGTCCTGTCGAAGATGACATGATCAAGGTTCTGAGGGTTGCTATTCTCTGCACTACTAAGCTTCCGTCTCTGCGTCCTACAATGAGAAACGTGGTGAAGATGCTTCTTGATGCCGATCCTTGCACCATTACCACTGCAGACAAGAATCCAGAAAAATATTAA 2922 0.4124 MAKIPLPLSLHFFLTTFYLFLLPFPPSTALTVETQALLEFKKQLKDPLNSMESWTADSEQSPCDFAGVSCDPISRDVTGISLENKSLSGEISPSISVLKNLSSLVLASNSISGDLPFGLSNCKNLQILNLTLNNLSGSLPDFSALKNLQVLDLSENYFSGRFPDWVGNLTGLTSLALALNNFDEGEIPESLGNLKSLTFIYLAGCNFSGEIPESIFDLKSLQSLDFSTNNISGNLPKAISNLRNLNKIELYKNKLTGEIPPELANLTLLREIDISNNQMSGKLPTEIGNLKNLVVFQLFNNYFSGELPEGFGDLQYLVGFAIYGNNFSGEFPANLGRFSPLNSIDISENEFSGGFPRFLCENKKLQFLLALDNNFSGELPESYADCKSLARFRINKNRLSGKISNGMWGLPYAKIIDFGDNGFSGGISSDIGISTSLNQLSLQNNKFSGELPSELGKLSQLEKLIANNNAISGKIPSQIGNLKQLSSLHLEENSLAGSIPSELGECTRLVDLNLAGNSLSGDIPETFALLSSLNSLNLSQNRLSGSIPENVQKLKLSSIDFSENQLTGRVPTGLVIVGGDQAFSGNTELCIDQKLANQINSGMGVCSGNHSHKKVIENKLFLVCIISSALIVILAGLLLVSYRNFKFNEAYMEDDLKEGQKKYPSWKLESFHQKELDADEICNLEEENLIGSGSSGKVYRLDLKKNGGTVAVKKLWKGKEVKVFTAEIEILGKIRHKNILKLYACLMRGGSNFLVLEYMENGNLSQALRRQIKGGKPELDWTQRYKIAVGAAKGIAYLHHDCSPAVIHRDIKSTNILLDGDYEPKIADFGVARIAEESAGGLEMSCFAGTHGYIAPELAYSLKVSEKSDVYSFGVVLLELLSGRSPVEPEYGEGKDIVYWVSTHLNCREDIIEVLDRRVSGPVEDDMIKVLRVAILCTTKLPSLRPTMRNVVKMLLDADPCTITTADKNPEKY* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00179 973 Gene3D Phosphorylase Kinase; domain 1 682 762 - -
Eupl03g00179 973 ProSitePatterns Protein kinases ATP-binding region signature. 690 714 IPR017441 GO:0005524
Eupl03g00179 973 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Eupl03g00179 973 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Eupl03g00179 973 FunFam Receptor-like protein kinase HSL1 292 599 - -
Eupl03g00179 973 FunFam Leucine-rich receptor-like protein kinase family protein 185 288 - -
Eupl03g00179 973 ProSiteProfiles Protein kinase domain profile. 684 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00179 973 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 955 - -
Eupl03g00179 973 FunFam Leucine-rich receptor-like protein kinase family protein 674 758 - -
Eupl03g00179 973 Gene3D Ribonuclease Inhibitor 184 243 IPR032675 -
Eupl03g00179 973 Gene3D Ribonuclease Inhibitor 244 317 IPR032675 -
Eupl03g00179 973 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 31 184 - -
Eupl03g00179 973 SUPERFAMILY L domain-like 255 571 - -
Eupl03g00179 973 Gene3D Transferase(Phosphotransferase) domain 1 763 968 - -
Eupl03g00179 973 CDD STKc_IRAK 690 955 - -
Eupl03g00179 973 SMART LRR_typ_2 266 290 IPR003591 -
Eupl03g00179 973 SMART LRR_typ_2 530 553 IPR003591 -
Eupl03g00179 973 SMART LRR_typ_2 98 122 IPR003591 -
Eupl03g00179 973 SMART LRR_typ_2 218 242 IPR003591 -
Eupl03g00179 973 SMART LRR_typ_2 482 506 IPR003591 -
Eupl03g00179 973 SMART LRR_typ_2 145 169 IPR003591 -
Eupl03g00179 973 Gene3D Ribonuclease Inhibitor 318 599 IPR032675 -
Eupl03g00179 973 FunFam leucine-rich repeat receptor-like protein kinase TDR 759 967 - -
Eupl03g00179 973 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Eupl03g00179 973 SUPERFAMILY L domain-like 62 332 - -
Eupl03g00179 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Eupl03g00179 973 Pfam Protein kinase domain 685 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00179 973 SUPERFAMILY Protein kinase-like (PK-like) 681 955 IPR011009 -
Eupl03g00179 973 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Eupl03g00179 973 SMART serkin_6 684 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00179 Eupl-Chr3 5513690 5523501 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00179 15 967 Receptor kinase-like Gene Family AT1G72180 57.321 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00179 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00179 - - msin:131236763 1345.87