Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00177 ATGAACAGATTACATGGTTCTATCCCTGATTTTGTCGCAGACTTGCCGAATTTGGAAACTCTTGGGCTGTGGATGAACAATTTCACAGGTGTAATTCCCAAGAAACTAGGCCAAAATGAGAAACTTCAAGTGCTGGATCTGTCGTCAAATAAGCTTACTGGTACGATTCCTCAAGGCCTGTGTTCCTCAAATCAGCTCAGGATACTGATTCTCCTGAAAAATTTCCTCTTTGGGCCTATCCCTGAGGGCTTGGGGACGTGTTTGAGCCTCACTAGAGTAAGATTGGGGCAGAATTACTTGAATGGTAGCATTCCAAATGGCTTCCTCTACTTACCTCAGCTTGATTTAGCAGAGTTGCACAACAACTACCTATCTGGAATATTGACAGAGAATGGTAACAGCAGCTCGAAGCCTGCTAAATTGAGTCAATTGAACCTATCAAACAATCTCCTCTCAGGGTCTCTACCCTATTCAATTTCAAATTTCTCTTCCCTCCAAATCCTCCTACTGAGCGGAAACCAGTTTTCGGGCTCGATCCCACCTTCAATTGGGGACCTCCACCAAGTACTAAAGCTCGATCTCAGCCGAAACACATTCTCATATGAAATTCCACCGGAGATCGGTAGCTGTTCCCATCTAGCCTATCTAGACTTGAGCCAGAACAACCTCTCAGGCCCTATTCCATCAGAGATTTCGAATATCCGTATACTGAATTACTTGAATATATCAAGGAACCACCTCAATCAGGCCATACCCAAATCAATTGGGTCCATGAAGAGCCTAACCGCTGCCGATTTTTCCTTCAATGATCTATCCGGTAAGCTACCCGAATCTGGCCAATTCTCCTACTTCAATGCGTCATCCTTCGCCGGCAATGCCCACCTCTGCGGCTCTCTACTGAACAACCCATGTAATTTCACCACAATTACAATGAAACCTGGAAAATTGCCCGGTGATTTCAAGCTGATCTTTGCTCTAGGCCTTCTCATATGCTCGCTCGTGTTCGCTGCGGCCGTGATCATCAAGGCCAAATCATTCAAGAGACCCGGTTCGGATACCTGGAAGATGACCGCATTTCAGAAGGTTGAATTCACAGTCACCGACGTGCTCGAATGCATGAAAGACTGCAATGTGATCGGACGAGGAGGAGCGGGGATCGTTTACGTCGGGAAAATGCCCAACGGGGAAGAAATTGCAGTAAAGAGACTACTTGGGTTCGGGTTTGGTAACACTAGTCATGATCATGGGTTCAGAGCTGAGATACAAACACTGGGTAACATTCGACACAGGAACATAGTTAGATTGTTGGCATTCTGTTCGAATTCGCAGACGAATTTGTTGGTTTACGAGTACATGAGGAATGGAAGCTTGGGAGAAGCTCTGCATGGGAAGACAGGTGGGTTCTTGGGGTGGGACTTGAGGTATAAGATAGCCATTGAAGCTGCTAAGGGACTGTGTTATCTTCACCATGACTGTTCTCCTCTCATAATTCACAGAGACGTTAAGTCCAATAACATTCTCTTGAATTCCAGCTTCGAAGCCCATGTTGCTGATTTTGGGCTAGCCAAGTTCTTGGTGGATGGTGGCGCATCGGAGTGCATGTCAGCAATTGCAGGTTCATATGGATACATTGCGCCGGAGTATGCTTATACCCTCAAGGTCGACGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTCCTCTTGGAGCTGATCACTGGGCGTCGTCCAGTTGGTGAGTTCGGGGATGGTGTTGATATCGTTCAATGGGCCAAGAGAGCAACCAATTGTAGCAAAGAAGCGGTGATCCAAATCGTAGATCCTAAACTAAGTGCAGTGCCTCCTGACGAGGCAATGCACGTGTTCTTCATCGCCATGCTATGCATTCAGGAGAATAGCATCGAACGGCCGGCGATGCGAGAGGTGGTCCAGATGCTCTCGGAGTTCCCACGCCATACCACTACCATCCAGCATCAATCTCCATCTTCTTCTGATCCTCAACAACAGTCAAAGAACCTGGATTTCCCTAAACTCCCACCAGATCTTTTGATCTAA 2052 0.4698 MNRLHGSIPDFVADLPNLETLGLWMNNFTGVIPKKLGQNEKLQVLDLSSNKLTGTIPQGLCSSNQLRILILLKNFLFGPIPEGLGTCLSLTRVRLGQNYLNGSIPNGFLYLPQLDLAELHNNYLSGILTENGNSSSKPAKLSQLNLSNNLLSGSLPYSISNFSSLQILLLSGNQFSGSIPPSIGDLHQVLKLDLSRNTFSYEIPPEIGSCSHLAYLDLSQNNLSGPIPSEISNIRILNYLNISRNHLNQAIPKSIGSMKSLTAADFSFNDLSGKLPESGQFSYFNASSFAGNAHLCGSLLNNPCNFTTITMKPGKLPGDFKLIFALGLLICSLVFAAAVIIKAKSFKRPGSDTWKMTAFQKVEFTVTDVLECMKDCNVIGRGGAGIVYVGKMPNGEEIAVKRLLGFGFGNTSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNSQTNLLVYEYMRNGSLGEALHGKTGGFLGWDLRYKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSSFEAHVADFGLAKFLVDGGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGEFGDGVDIVQWAKRATNCSKEAVIQIVDPKLSAVPPDEAMHVFFIAMLCIQENSIERPAMREVVQMLSEFPRHTTTIQHQSPSSSDPQQQSKNLDFPKLPPDLLI* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00177 683 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 343 451 - -
Eupl03g00177 683 MobiDBLite consensus disorder prediction 652 673 - -
Eupl03g00177 683 MobiDBLite consensus disorder prediction 652 683 - -
Eupl03g00177 683 Pfam Protein kinase domain 376 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00177 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Eupl03g00177 683 SUPERFAMILY L domain-like 3 290 - -
Eupl03g00177 683 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 452 662 - -
Eupl03g00177 683 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 19 308 - -
Eupl03g00177 683 ProSiteProfiles Protein kinase domain profile. 373 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00177 683 Gene3D Transferase(Phosphotransferase) domain 1 452 671 - -
Eupl03g00177 683 Gene3D Phosphorylase Kinase; domain 1 340 451 - -
Eupl03g00177 683 SUPERFAMILY Protein kinase-like (PK-like) 362 645 IPR011009 -
Eupl03g00177 683 SMART serkin_6 373 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00177 683 PANTHER LEUCINE RICH REPEAT KINASE 2 2 648 - -
Eupl03g00177 683 Pfam Leucine rich repeat 16 73 IPR001611 GO:0005515
Eupl03g00177 683 Gene3D Ribonuclease Inhibitor 1 307 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00177 Eupl-Chr3 5454453 5458041 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00177 2 682 Receptor kinase-like Gene Family AT5G65700 61.572 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00177 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00177 - - ming:122070458 1127.08