Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00160 ATGGCAACGGTTGGAGGTGGCGAGGAGATGTTGTACTCGCCGAAGAATCGGGTGAAGTTCTTGTGCAGCCATGGTGGGAAGATATTGCTGAGGCCCGGTGACGGTCATCTCAAATACGTCGGGGGTGAGACCCGCATCGTCGCCGTTCCTCGCGACATCGACTTCTCAGGGATAATGAAGAAGCTTCTTAGCCTATCCGATGGTGATATGGTTCTCAAGTACCAATTGATCCCTGATGACTTGGATACATTAGTATCTGTGAGATCCGAGGAGGACCTCCACCACATGTTTGATGAGAATGATCGCCTCAATGCGAAATCATTTGAAAATGGTGGCACCCCAAGGCTGCGCACCTTCTTGTTCCCTTCTAATCCGATCTTGATCGAGAACCAAACAGCTTCTAACACCATGGATACCTATACACTTGAGCAGCGCTACATCGATGCCATCAACGGAGTTGTGCGTACTCCAACTTTCAGCATTTCCTCCTCCGGATCTTCCCCAAAGTCCACTCCCCCTAATGGCTACATCAATATTGACACTATCAACCAGGACACTTTCATATCCAACGGCCATCAGAATAGCAATATCAGAGAGATCCAGAGGGTCTATAGTTCTCCCAGTCTATATTGCCTCAGCCACCACCACCACCACTACCACCATCACCTCCACCCCAGTGACCAGCAGCTACGCTACCAATCCCCCGGACTACGGACGGGCTTATCGATCAGGCGAAACGATATTGGGAAGTGCCAGGTGGGTTATACTCCCACTCCGTACTACCCACCAACCAGACCCCACAGTGGGACCAGCGGATGCATTGCTTGTGGACGTGTTGAGGAGTGCAGGAGTTTAGAGGATTGGAGATAG 870 0.5103 MATVGGGEEMLYSPKNRVKFLCSHGGKILLRPGDGHLKYVGGETRIVAVPRDIDFSGIMKKLLSLSDGDMVLKYQLIPDDLDTLVSVRSEEDLHHMFDENDRLNAKSFENGGTPRLRTFLFPSNPILIENQTASNTMDTYTLEQRYIDAINGVVRTPTFSISSSGSSPKSTPPNGYINIDTINQDTFISNGHQNSNIREIQRVYSSPSLYCLSHHHHHYHHHLHPSDQQLRYQSPGLRTGLSIRRNDIGKCQVGYTPTPYYPPTRPHSGTSGCIACGRVEECRSLEDWR* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00160 289 SMART PB1_new 32 123 IPR000270 GO:0005515
Eupl03g00160 289 Gene3D - 38 120 - -
Eupl03g00160 289 Pfam PB1 domain 36 122 IPR000270 GO:0005515
Eupl03g00160 289 CDD PB1_UP2 21 121 - -
Eupl03g00160 289 PANTHER OS05G0427100 PROTEIN-RELATED 13 256 - -
Eupl03g00160 289 SUPERFAMILY CAD & PB1 domains 34 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00160 Eupl-Chr3 4900359 4904704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00160 17 197 MAP Kinase Kinase Kinase AT3G46920 36.898 2.39e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00160 - - mof:131164986 241.506