Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00152 ATGCCGGTTGATCGGAGAGAATTACAAATTGCTGAGATTGGATTTTTTTGGGGAATTTCGGGTTTCAAGATGAAGGAATTTGGCAATTACCTCTTTCGGAATAGTCGAATTATGGGTTGCATTTGCTCAAAAGCTGCAGCGGATGAGTACGTTGAGAGCCAGAGAGAGAATGAATTGAGCAAGTCTTCAAAACAACGATTGGTTGCTCCTTCTGTAGTGGAGGCTGATGGTAGTCGTGGGACCAATGGAACAGTGAGGCTGATATCGAAGCCACCGCAACCACAGAATGTTATATCAGCTCCAATTTCATCTGATGAGGAGGAGAAGAAGCTGATAATTATTGAGAAGCCCACGAAAGCCCATCATCAGAGACGCGCAACAGTGGATATTGGAACAAATGGAGGAGAGCCGCCAATCTCTAGGATCGTTAGTATGCCCCATGGTATCAAGGGAGAACAGGCTGCTGCGGGGTGGCCGTCTTGGCTCACCGCAGTTGCAGGAGAAGCGATCAAAGGGTGGGTGCCTAGAAGGGCAGACTCATTCGAGAAATTAGACAAAATTGGACAAGGAACTTATAGCAGCGTATACAAAGCCCGTGACCTTGAAACTGGCAAAATTGTTGCACTGAAGAAAGTGCGGTTTGTGAATATGGATCCAGAGAGCGTCCGTTTTATGGCGAGGGAAATCTACATCTTGCGTAGGCTTGATCACCCGAATGTTATAAAGCTTGAGGGTCTGGTCACGTCACGAATGTCCTGCAGCTTGTACCTTGTATTCGAATACATGGAGCATGATCTTGCTGGGCTTGCAGCATCACCCAGTATCAAGTTTACTGAACCACAGATTAAATGTTATATGCAGCAGCTACTTCGCGGGCTTGAACACTGCCATAGTCATGGGGTCCTGCATCGAGACATCAAGGGTTCAAATCTTCTGATTGACAATAATGGCATTCTCAGGATCGCTGATTTTGGTCTGGCAACTTTTTTCCATCCTGATCAGAAGCAGCCGTTGACAAGCCGTGTTGTAACTCTATGGTACCGGCCTCCTGAGCTTTTGCTCGGTGCTACAGAGTATGGGGTTGCTGTGGATTTGTGGAGTACTGGGTGCATCCTTGCTGAATTGCTTGCTGGGAAGCCTATCATGCCAGGAAGGACAGAGGTGGAACAACTGCATAAGATCTTTAAGCTCTGTGGTTCACCCTCCGAGGAGTACTGGAGGAAATCGAGATTGCCACATGCAACAATTTTCAAGCCCCAACAGCCTTACAGGCGGTGTGTTGCTGAGACATTCAAGGACTTCCCCTCTTCTTCTTTGGCCCTCATAGATGTCCTCCTTGCCTTAGAACCTGAAAAGCGGGGATCAGCTGCTTCTGCACTTAAAAGTGAATTCTTCACGACAAATCCTCTCCCCTGTGATCCATCAAGTTTTCCTAAATATCCACCAAGCAAGGAGATCGACGCTAAACTTCGGGAAGAAGAAGCCAGAAGGCAAAGAGAAGCAGCCACAAAAGGCCATGGATCTGAATCGAGGAGAAGAGGTTCGAGAGATTTCAAAGCAGTGCCAGCCTCAGATGCCAATTCTGAATTACAGGTCTCGTTACAAATGTGGCAGGGACATGCAAACCCAAAAAGCAACAGTGAGAAGTACAATCCACAAGAGGATGGTGGGTCTGGCTTCCCCATTGAGCCTCCTAGAGGAACTGCTCAGAATGGTTGGTCTCATTCCGGTCCGTTGATTCACCCCAGTGCATTGGGATCTTCAAGGAATAAGAAAGCGAAGGAAGATGAAACTCTGGCGAGGACTGGACAAGCATTTGGTTCTTCAAGGAATGGCCCAGATTTGAGGGCACAGAGATCTCACATGCCTCAGGGAGCCACCGACTTGTCTAACTTCTCTGGTTTGGTAGCAGCAGCAAGAAGCAGTGCACGGATGGATAACCAGAGAGATAGGAGCACAGATTGCCACTGGCCAGAGCAGCGCTTGAATGCCAGATACAATCAGCTAGATGATGGTGAGCCCTCTGGAAAGCAGGAGTGGACCGACCATTTGCTGGATAGGCCAAGCTCTTCGCACAGGAAGGGTGAGAGGGGTGGAAAGGACTCTACGATGGGTAATGGCCCCAAGAAGAGCAGGATCCACTACTCTGGACCTTTACTGCCTCCAGGGGGAAACATGGAGGAAATGCTTAAAGAGCACGAGAGGCAAATCCAACAGGCTGTTCGCAAAGCTCGTCTTGACAAGGCCAAGACCAAGAAGAATTACGGTGATAATGCCCAGTCTGAAGCGCTACTTTACCCTGGTCGAAATGGAAGATGA 2319 0.4847 MPVDRRELQIAEIGFFWGISGFKMKEFGNYLFRNSRIMGCICSKAAADEYVESQRENELSKSSKQRLVAPSVVEADGSRGTNGTVRLISKPPQPQNVISAPISSDEEEKKLIIIEKPTKAHHQRRATVDIGTNGGEPPISRIVSMPHGIKGEQAAAGWPSWLTAVAGEAIKGWVPRRADSFEKLDKIGQGTYSSVYKARDLETGKIVALKKVRFVNMDPESVRFMAREIYILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPSIKFTEPQIKCYMQQLLRGLEHCHSHGVLHRDIKGSNLLIDNNGILRIADFGLATFFHPDQKQPLTSRVVTLWYRPPELLLGATEYGVAVDLWSTGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSRLPHATIFKPQQPYRRCVAETFKDFPSSSLALIDVLLALEPEKRGSAASALKSEFFTTNPLPCDPSSFPKYPPSKEIDAKLREEEARRQREAATKGHGSESRRRGSRDFKAVPASDANSELQVSLQMWQGHANPKSNSEKYNPQEDGGSGFPIEPPRGTAQNGWSHSGPLIHPSALGSSRNKKAKEDETLARTGQAFGSSRNGPDLRAQRSHMPQGATDLSNFSGLVAAARSSARMDNQRDRSTDCHWPEQRLNARYNQLDDGEPSGKQEWTDHLLDRPSSSHRKGERGGKDSTMGNGPKKSRIHYSGPLLPPGGNMEEMLKEHERQIQQAVRKARLDKAKTKKNYGDNAQSEALLYPGRNGR* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00152 772 SMART serkin_6 181 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00152 772 MobiDBLite consensus disorder prediction 675 700 - -
Eupl03g00152 772 Gene3D Transferase(Phosphotransferase) domain 1 264 505 - -
Eupl03g00152 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Eupl03g00152 772 MobiDBLite consensus disorder prediction 623 637 - -
Eupl03g00152 772 ProSiteProfiles Protein kinase domain profile. 181 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00152 772 MobiDBLite consensus disorder prediction 526 553 - -
Eupl03g00152 772 MobiDBLite consensus disorder prediction 490 726 - -
Eupl03g00152 772 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Eupl03g00152 772 FunFam probable serine/threonine-protein kinase At1g54610 264 505 - -
Eupl03g00152 772 Gene3D Phosphorylase Kinase; domain 1 168 263 - -
Eupl03g00152 772 Coils Coil 723 750 - -
Eupl03g00152 772 SUPERFAMILY Protein kinase-like (PK-like) 174 473 IPR011009 -
Eupl03g00152 772 MobiDBLite consensus disorder prediction 569 583 - -
Eupl03g00152 772 MobiDBLite consensus disorder prediction 747 772 - -
Eupl03g00152 772 MobiDBLite consensus disorder prediction 644 658 - -
Eupl03g00152 772 Pfam Protein kinase domain 181 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00152 772 PANTHER CELL DIVISION PROTEIN KINASE 179 471 - -
Eupl03g00152 772 CDD STKc_CDK9_like 181 465 - -
Eupl03g00152 772 FunFam probable serine/threonine-protein kinase At1g54610 168 263 - -
Eupl03g00152 772 MobiDBLite consensus disorder prediction 490 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00152 Eupl-Chr3 4647082 4657702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00152 173 504 Core Cell Cycle Gene Families AT5G10270 52.857 1.11e-119 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl03g00152 Pkinase 3.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00152 - - msin:131242781 1073.92