Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00143 ATGTGGATGCCACCTGCAGCATTGAGTCCTGTTTGGTTTTACTTTGTACCAAAAGCTGTCACTTATTTGAGAAAGATGGATAGAGCTTCAATCCTCAGAGACACAATAGAGTGCTTGAAGAAACTTATGCAGAGGATCAATAATCTCCACAACGAACTAGAGTGGACCTTTCTGGGTTCTTGCTGCATGCTGCAAGCTCTCCACCATTTCACACCTTCTCTACCTTCCCTGCCCTGCCGTGCCAAGGAGTTACTCTGCCTGAGCTTGTTGCACAGCCCATATGGTCAACCTGCCTGGGTAAACTTCCATCATCCACAAAAAGTCCTTATTCACCTTTATGAAGTAGAAGCTATGTTATGTAAATGGCCTATGGTCGATGCCATAGTTCACTTCTTAGAAGCATTGTCATTGATGGAGAGACAACAGTACCTGTTTACACAATTTTGGAG 449 0.441 MWMPPAALSPVWFYFVPKAVTYLRKMDRASILRDTIECLKKLMQRINNLHNELEWTFLGSCCMLQALHHFTPSLPSLPCRAKELLCLSLLHSPYGQPAWVNFHHPQKVLIHLYEVEAMLCKWPMVDAIVHFLEALSLMERQQYLFTQFW 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00143 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 69 IPR036638 GO:0046983
Eupl03g00143 149 Coils Coil 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00143 Eupl-Chr3 4241955 4245390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00143 13 113 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 47.115 1.30e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00143 - - gmx:100217332 91.2781