Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00141 ATGGCTCTGGTCTTGCATGCAGGAAGCGGAAATAAAAATGCCTTCAAGACACTCATTGCCGCAGAGTACACTGGTGTTAAAGTCGAACTGGTCAAGAATTTTGAGATGGGCATCTCCAATAAAACTCCCGAGTTTCTCAAGATGAACCCTATTGGAAAGATTCCTGTACTGGAAACTCCTGATGGTCCCATATTTGAGAGTAATGCCATGGCACGTTATGTTACTCGGCTGAAGGAAGACAATCCTCTTTTCGGTTCTTCAATGATTGAATATGGTCATATTGAACAGTGGATTGATTTTGCATCGTTGGAGATTGATGCCAATCTTTCGATCTGGCTTTACCCAAGACTTGGTTATAGAGTGTACCTTTCCCCAGCTGAGGAGGCTGCCATTACTGCTTTGAAGAGGGCACTAGGTGCTTTGAACACTCATCTTTCATCAAATACTTACCTGGTGGGACATTTTGCGACGCTTGCTGACATAATCATGACATGTAACTTGTCAATGGGGTACAGTCAAATCATGACTAAGAGCTTTACCTTGGAGTTCCCTCATGTTGATAGATACTTCTGGACCATGGTTAACCAGCCAAATTTCAGCAAGGTAATGGGTGAGGTAAAGCAGGCAGAATCTATTCCACCAGTTCCATCAGCAAAGAAGCCCGCTCAACCAAAAGAATCTCCTAAACCCAAGGCAAAGGATGAATCGAAGAAAGAGGCTAAGAAAGAAGTCAATAAAGAGCCTGCCAAGCCTAAAGAAGAAGAGGCCGCTGAGGAGGAAGAGGCACCGAAGCCCAAGCCTAAGAACCCTCTAGATCTGTTGCCCCCGAGTAAGATGATATTAGACGAGTGGAAGAGGCTCTACTCGAATACCAAGACCAACTTCCGTGAGGTTGCTATTAAAGGATTTTGGGACATGTACGATCCGGAAGGATATTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACAGTCTCATTTGTCACCTTGAACAAGGTCGGTGGTTTTCTGCAACGGATGGATCTGGCTCGCAAGTATGCATTTGGAAAGATGCTGGTGATCGGCTCAGAGCCACCTTTCAAGGTGAAGGGATTGTGGATCTTCCGTGGGCAAGAAATACCTCCATTTGTAGTTGAAGAGTGCTACGACATGGAGCTGTATGAGTGGAAGAAGGTGGATATATCAGATGAAGCCCAGAAGGAGCGTGTCAATCAGATGATCGAAGATCAAGAGCCTTTTGAGGGAGAAGCTCTGTTGGATGCCAAGTGTTTCAAATGA 1284 0.4486 MALVLHAGSGNKNAFKTLIAAEYTGVKVELVKNFEMGISNKTPEFLKMNPIGKIPVLETPDGPIFESNAMARYVTRLKEDNPLFGSSMIEYGHIEQWIDFASLEIDANLSIWLYPRLGYRVYLSPAEEAAITALKRALGALNTHLSSNTYLVGHFATLADIIMTCNLSMGYSQIMTKSFTLEFPHVDRYFWTMVNQPNFSKVMGEVKQAESIPPVPSAKKPAQPKESPKPKAKDESKKEAKKEVNKEPAKPKEEEAAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWIFRGQEIPPFVVEECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00141 427 SMART EF1G_2 266 374 IPR001662 GO:0003746|GO:0006414
Eupl03g00141 427 Gene3D - 80 213 - -
Eupl03g00141 427 SUPERFAMILY Thioredoxin-like 2 84 IPR036249 -
Eupl03g00141 427 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Eupl03g00141 427 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Eupl03g00141 427 FunFam Elongation factor 1 gamma 80 215 - -
Eupl03g00141 427 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Eupl03g00141 427 CDD GST_C_EF1Bgamma_like 90 210 - -
Eupl03g00141 427 Pfam Elongation factor 1 gamma, conserved domain 266 374 IPR001662 GO:0003746|GO:0006414
Eupl03g00141 427 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
Eupl03g00141 427 MobiDBLite consensus disorder prediction 224 267 - -
Eupl03g00141 427 SFLD Main (cytGST) 4 193 - -
Eupl03g00141 427 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 267 427 IPR001662 GO:0003746|GO:0006414
Eupl03g00141 427 Gene3D Glutaredoxin 1 74 - -
Eupl03g00141 427 SFLD Glutathione Transferase (cytosolic) 4 193 IPR040079 -
Eupl03g00141 427 MobiDBLite consensus disorder prediction 210 274 - -
Eupl03g00141 427 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 427 IPR044628 GO:0004364
Eupl03g00141 427 FunFam Elongation factor 1-gamma 1 267 427 - -
Eupl03g00141 427 SUPERFAMILY GST C-terminal domain-like 81 213 IPR036282 -
Eupl03g00141 427 FunFam Elongation factor 1B gamma 1 74 - -
Eupl03g00141 427 CDD GST_N_EF1Bgamma 3 77 - -
Eupl03g00141 427 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 267 427 IPR036433 GO:0003746|GO:0006414
Eupl03g00141 427 SUPERFAMILY eEF1-gamma domain 267 427 IPR036433 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00141 Eupl-Chr3 4189968 4196207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00141 1 427 Eukaryotic Initiation Factors Gene Family AT1G57720 69.930 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00141 K03233 - vvi:100246571 692.189