Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00132 ATGGAGCCGACCGGCGCGGGCACGACGAGCATAGGCGACACCCCGTTAGTTCAACGCGGAGGGAACTATAGGGGAGTTCGAAAGCGTAAATGGGGCAAATGGGTATCCGAAATTCGAGAACCTGGGAAGAAAACACGAATTTGGTTAGGGAGCTTCGAAACACCGGAAATGGCTGCCACCGCCTACGACGTAGCCGCATTACACCTCAGGGGACGTGGGGCGCGACTCAATTTTCCCGAACTAGTCGATGTGCTTCCTCGAACTACCAGTTCGAAACCCGACGACATTCGATCGACAGCACAGAATGCAGCTTCGCGGCTTAAAGGATCAATGGGAACGTTGGAGGTGGGTAGCTCTAGTACAAACACTGTTCCGATGATTATCGGACTGTCGCCGAATCAAATTCAAGCGATCAACGAGTCGCCATTGGACTCGCCTAAGATGTGGATTGAGTTAGCAGAAGCATTATTGATGGAACCACCATTAACTTTGTTTTCAAAGGACGTTGAGATGGGGGAGTGGGAAGACATTCAACAGTATCATCTATGGGATTAA 555 0.5063 MEPTGAGTTSIGDTPLVQRGGNYRGVRKRKWGKWVSEIREPGKKTRIWLGSFETPEMAATAYDVAALHLRGRGARLNFPELVDVLPRTTSSKPDDIRSTAQNAASRLKGSMGTLEVGSSSTNTVPMIIGLSPNQIQAINESPLDSPKMWIELAEALLMEPPLTLFSKDVEMGEWEDIQQYHLWD* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00132 184 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Eupl03g00132 184 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 120 - -
Eupl03g00132 184 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Eupl03g00132 184 FunFam Ethylene-responsive transcription factor 2 22 80 - -
Eupl03g00132 184 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00132 Eupl-Chr3 3951904 3953210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00132 6 184 AP2-EREBP Transcription Factor Family AT1G71450 53.476 2.91e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl03g00132 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00132 - - nnu:104589184 225.713