Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00124 ATGGCATCTCCTTGGTCGGTTCGTGAAATCTCGAGATGCAACATAAAACCACATCGTATGCCAGAAGAAGCCCAACAGCCTTGCTATTTAACGGCATGGGATTTATCCGTGCTCACCGCAACCTACATTCAACAAGGTCTCATCTTCTCCCAACCACATACAATCACCACCACCCTCCTCCTCGACAAACTTAAGGATTCTCTCTCATGTACTCTCCTTCACTTCTTCCCCCTTGCCGGTCGCCTCGCAACCAAAAAGGACGATAACCCACCTTCCTATACTATCTTCGTAGACTGCACTAATGCTCCTGGAGCTGAATTCATCCATGCGGTTGCAGCAGACATAACGATATCCGACATACTCACCCCGATCGATGTTCCAACCATCGTAAATTCGATGTTCCCGCTCCATGGAGTTATCAACCATGACGGACACACCATGCCGTTGCTCTCCGTTCAGGTGACTGAGCTGGTTGATGGCGTCTTCGTCGGGTGCTCTTTCAACCACGCTGTTGGCGATGGATCCTCTTTCTGGCATTTCTTGAATACATGGGTCTCCTCTTCTCCAGAGTCCAAACCACATACAATCACTACCACCCTCCTCCTCGACACGCTTAAGGATTCTCTCTCATGTACTCTCCTTCACTTCTTCCACCTTACCGGCCGCCTCGCAACAAAAAAAGACGACAACCCACCTTCCTACACTATCTTCATAGACTGCACTGATGCTCCCGGAGCCGAATTCATCCATGCCGCTGCAGCAGACGTAACGATAGCCGATATACTCACCCCGATCGATGTTCCAACGATCGTAAATTCGATGTTCCCGCTCCATGGAGTTCTCAATCATGATGGCCACACCATGCCGTTGCTCTCCGTGCAGGTGACTGAGCTGGTTGACGGCATCTTCGTCGGGTGTTCTTTCAACCACGCTGTTGGCGATGGATCTTCTTTCTGGCATTTCTTGAATACATGGTCTGAGATTTGTAGATCTAGAGGAGACAAGGGGAGTGTAATAATCTCGCGCCCACCCGTCATCAAACGTTGGTTTCCTGAGGGCCATGGTCGTCACAACATTAATCTTCCTTTCTCCCACTCCGACGAGTTCATAGAAAGGTTCAACCCGCCACTGTTCAGACAGAGAATCTTTCATTTCTCATCTCAATCCATGGCGCGACTGAAAGCCAAGGCCAACCAAGAGTGCAATACCGACAAGATCTCCTCCTTCCAGTCCCTGTGTGCGCTATTGTGGAGATTGGTGATTCGAGTGCGTCATCTACCTGGTGATCAGACAACCAGATGCCTAATGTCGATCAATAACCAGATTGCACCCGCCCTTGTCTCCAGACCCTAG 1353 0.4996 MASPWSVREISRCNIKPHRMPEEAQQPCYLTAWDLSVLTATYIQQGLIFSQPHTITTTLLLDKLKDSLSCTLLHFFPLAGRLATKKDDNPPSYTIFVDCTNAPGAEFIHAVAADITISDILTPIDVPTIVNSMFPLHGVINHDGHTMPLLSVQVTELVDGVFVGCSFNHAVGDGSSFWHFLNTWVSSSPESKPHTITTTLLLDTLKDSLSCTLLHFFHLTGRLATKKDDNPPSYTIFIDCTDAPGAEFIHAAAADVTIADILTPIDVPTIVNSMFPLHGVLNHDGHTMPLLSVQVTELVDGIFVGCSFNHAVGDGSSFWHFLNTWSEICRSRGDKGSVIISRPPVIKRWFPEGHGRHNINLPFSHSDEFIERFNPPLFRQRIFHFSSQSMARLKAKANQECNTDKISSFQSLCALLWRLVIRVRHLPGDQTTRCLMSINNQIAPALVSRP* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00124 450 Gene3D - 5 191 IPR023213 -
Eupl03g00124 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 195 440 - -
Eupl03g00124 450 Gene3D - 192 358 IPR023213 -
Eupl03g00124 450 Pfam Transferase family 193 439 - -
Eupl03g00124 450 Gene3D - 365 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00124 Eupl-Chr3 3561428 3568966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00124 205 441 Monolignol Biosynthesis Gene Families AT5G48930 28.226 6.96e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00124 - - nnu:104606816 323.553