Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00110 ATGGCGTCTCCTTCAGCGGTTCGTGAAATCTCGAGATGCAACATCAAACCACGGCGTATGCCAGAAGAAGCCCAGCAGCCTTGCTATTTGACGCCATGGGATTTATCCCGGCTCACCATAACCTACATTCAACAGGGTCTCCTCTTCTCCAAACCACATACAATCACTACCACCCTCCTCCTCGACACGCTTAAGGATTCTCTCTCATGTACTCTCCTTCACTTCTTCCACCTTACCGGCCGCCTCGCAACAAAAAAAGACGACAACCCACCTTCCTACACTATCTTCATAGACTGCACTGATGCTCCCGGAGCCGAATTCATCCATGCCGCTGCAGCAGACGTAACGATAGCCGATATACTCACCCCGATCGATGTTCCAACGATCGTAAATTCGATGTTCCCGCTCCATGGAGTCCTCAATCATGATGGCCACACCATGCCGTTGCTCTCCGTGCAGGTGACTGAGCTGGTTGACGGCATCTTCGTCGGGTGTTCTTTCAACCACGTTGTTGGCGATGGATCTTCTTTCTGGCATTTCTTGAATACATGGTCTGAGATTTGTAGATCTAGAGGAGACAAGGGGAGTGTCATAAAAGGATTTGCTCTCAAACTATCGGATCAAGGTTTTGGAACGGGAGCAGCACCCGTAGTAGGAGGTTCCAGTTACTAA 672 0.5 MASPSAVREISRCNIKPRRMPEEAQQPCYLTPWDLSRLTITYIQQGLLFSKPHTITTTLLLDTLKDSLSCTLLHFFHLTGRLATKKDDNPPSYTIFIDCTDAPGAEFIHAAAADVTIADILTPIDVPTIVNSMFPLHGVLNHDGHTMPLLSVQVTELVDGIFVGCSFNHVVGDGSSFWHFLNTWSEICRSRGDKGSVIKGFALKLSDQGFGTGAAPVVGGSSY* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00110 223 Gene3D - 9 206 IPR023213 -
Eupl03g00110 223 Pfam Transferase family 25 191 - -
Eupl03g00110 223 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00110 Eupl-Chr3 3194105 3200053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00110 47 189 Monolignol Biosynthesis Gene Families AT5G48930 30.137 3.08e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00110 - - nnu:104594021 258.455