Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00104 ATGGGTTTCCTTGTAGTGCTCTGCATTGCTGTTTCTGCTGTTCTCTTCTCCCACTCGGCCGCTGCTTTAAACGCTCTTACCGACGAGGAGGCCTTGCTCTCATTCAAGACTCTAATAACCGCTGACCCTTCCAACATCCTATCCACATGGAACAGCAACTTGAGTCCTTGCAATTGGACGGGAGTCATGTGTGATGAAATCAAGCAAAGAGTCGTCGGCCTAGATCTTCAGGGCCTTGGATTATCAGGCATCATAAGCCCATATCTTGCCAATCTCTCTTACCTTCATTCTCTTCAGCTACAAAAGAACCAATTTGAGGGAACTATTCCTGATCGAATAGGTGATCTTTCTCGTTTGCATGTTCTAAACATAAGTGCAAACCACATCCAAGGTACGATCCCACGTAACATCAGCAGGTGCTCCGAGCTCATAGTCCTAGACTTAACCGGAAATGAGATCTCCGGTGTTATTCCTATAGAGCTCGGTCGTCTTTCGAAGCTCCAAGTCGTCAAGATGAACCGAAACCGGCTTTCAGGTGCAATTCCCCCATCCATTGGAAACCTCTCATCACTAACCACACTAAAATTAGCAACCAATTCTCTTAGTGGAACCATACCCAGTGACTTTGGTCGTCTTCAAAACTTACAAAAACTCCAACTCGGCATTAACAATCTCACAGGCATTGTTCCTCCATCCCTATACAACATTTCATCTCTTGTTTCTATTGCTTTAGCTTCAAACCGGCTGTGGGGTGAAATTCCAAGTGATGTCGGCGATACGCTTCGGAATCTTTTAGAAATTAATTTCGGCGTAAACGATTTCACTGGTGCATTTCCTGGATCACTACACAACCTCACCAAGATCCAAAGCATTCAGATGGCACAAAACTTTCTTGTTGGATCAATTCCACCAGGACTAGGGAATCTCCCCGACCTCAGAGTGTATGATATTGGGTTCAATCGGATCGTAAGCTCTGGCGAAGCTGGACTGAATTTCATCACATCTTTGACAAACAGCACCCATCTTGAATTCCTTGCATTGGATGACAATCTTCTAGAGGGTGTGATTCCAGAATCGATTGGCAATCTTTCAACCCTTCTCACCAAATTATATATGGGTGGGAATCGGAGGATCTACGGCAATATTCCTGCTTCGATCGGTCGGCTTAGAGGCTTGGCTTTGCTAAATTTAAGCCATAATTCATTGTCCGGTGAAATTCCATCGGAAATTGGCCAGCTCAAGGAACTGCAGCTGCTGGGTTTGGCTGGAAACAAAATAGCAGGTGAAATTCCTGCCTCCTTAGGAAATCTGAGCAAATTGAATGAGCTTGAATTGTTTGGGAATGAGCTGGTGGGAAGAATACCAACCACTTTTAATAACTTTCAAAGCTTACTTTCGTTGGATCTATCCAAAAATCGGCTCAATGGAAGCATACCCATAGAAGTTTTCGGGCTCTCTAGTTTGAGCATTCTTCTCAACTTGTCCAAAAACTCTCTAAATGGACCTTTGCCTCGAGAAATTGGGAACTTGGAAAATATTGTCACAGTTGATCTCTCGGATAATGCCTTGTTCGGAAGTATTCCGGACTCAATTGGCAACTGTAAGAGCTTGGAGGAACTGTTCATGTCCAATAATTTGTTCTCAGGTCTTATTCCTAGTACTCTAGGAGAGGTGAAAGGACTGGAGACACTAGACCTCTCTTCAAACCAACTCTCAGGTCCCATTCCTGATGATCTTCAGAGACTTCAGGCCCTCCAGTTCTTGAACCTCTCTTTCAATAACCTCGAAGGAGAAGTTCCGAATGACGGTGCCTTCAGAAATCTCTCCAGAGTCCATCTCGACGGAAACTCGAAACTTTGCTTTCCTTCAGCTTGTAAGAGCAATCAAGATCTTGGAAAAATATCAATTGCAGTTCGAAGTATAATCGCAACCGCAGGTTCGATAGCATTTTGTCTTTTGGTAGCGTTGTTATTATGTATTTCCTTCAACAGAAGAAAAAACTCGGCAAAGATGAAAGTGTCATCGGACTTGTTTAAAGGGCAACATCAAATGATTTCCTATGAAGAGCTTCGAACAGCAACAGGGAATTTTGATCAGACAAATTTGATCGGAAGTGGGAGCTTCGGGTCTGTCTACAAAGGAATCCTCAGAGACGGAAGGGCCATTGCAGTGAAAGTTTTGGACCTCGGACAAACAGGAGCTTCAAAGAGCTTTTGGGCTGAATGTGAGGCTTTGAGGAATGTACGACATCGGAATCTGCTTAAACTGATTACCTCATGCTCAAGTGTCGATAACGCGAACACGGAATTTATGGCTTTGGTTTATGAATTCATGGGAAATGGGAGCTTGGAGGATTGGTGTCGAGGAAGAAGAAGGCATACAAGTGGAGATGGGTTGAATGTAGTGGAGAGGTTGAACGTGGCCATTGATGTTGCTTATGCCATGGACTACCTGCACAATGACTGCGAAGCTCCGGTGGTGCACTGTGACCTTAAGCCAAGCAACGTACTCTTGGACAAGGACATGACTGCAAAAATAGGAGACTTTGGGGTGGCGAGGCTGCTGGTTGTGAAAGCAGATGATCAACAATCTTCTATTACCAACACATATGGCCTCAAGGGTTCTATAGGATACATACCTCCAGAGTATGGGTTGGGGGGGAAACCATCAACAAGAGGAGATGTTTACAGCTACGGTGTCATGTTGCTAGAGCTATTTACAGGGAGGAGCCCAACCCATGAGGCTTTTACAGGGGATGTAAGCATAGCCAAGTGGGTGAAATCGTCTTTCCCCGACAACACTACCCATGTCCTGGACCCTGACCTGCTACTACTAATGGATGATGTCCATCATGAAGGCCAACTGATAAGTTCGGAAATCCGACAGGAATGCTTGGTATCAATCATCGGGGTTGGGCTATCTTGTGTTATTGAGTCTCCTGAAGCACGCATTAGCATGAGAAACATCGTCCACAAATTGAAGAATATAAGAGACAATCTCCACAAGTCAAGTCCAGGTGAAGATAAAATATGA 3033 0.4454 MGFLVVLCIAVSAVLFSHSAAALNALTDEEALLSFKTLITADPSNILSTWNSNLSPCNWTGVMCDEIKQRVVGLDLQGLGLSGIISPYLANLSYLHSLQLQKNQFEGTIPDRIGDLSRLHVLNISANHIQGTIPRNISRCSELIVLDLTGNEISGVIPIELGRLSKLQVVKMNRNRLSGAIPPSIGNLSSLTTLKLATNSLSGTIPSDFGRLQNLQKLQLGINNLTGIVPPSLYNISSLVSIALASNRLWGEIPSDVGDTLRNLLEINFGVNDFTGAFPGSLHNLTKIQSIQMAQNFLVGSIPPGLGNLPDLRVYDIGFNRIVSSGEAGLNFITSLTNSTHLEFLALDDNLLEGVIPESIGNLSTLLTKLYMGGNRRIYGNIPASIGRLRGLALLNLSHNSLSGEIPSEIGQLKELQLLGLAGNKIAGEIPASLGNLSKLNELELFGNELVGRIPTTFNNFQSLLSLDLSKNRLNGSIPIEVFGLSSLSILLNLSKNSLNGPLPREIGNLENIVTVDLSDNALFGSIPDSIGNCKSLEELFMSNNLFSGLIPSTLGEVKGLETLDLSSNQLSGPIPDDLQRLQALQFLNLSFNNLEGEVPNDGAFRNLSRVHLDGNSKLCFPSACKSNQDLGKISIAVRSIIATAGSIAFCLLVALLLCISFNRRKNSAKMKVSSDLFKGQHQMISYEELRTATGNFDQTNLIGSGSFGSVYKGILRDGRAIAVKVLDLGQTGASKSFWAECEALRNVRHRNLLKLITSCSSVDNANTEFMALVYEFMGNGSLEDWCRGRRRHTSGDGLNVVERLNVAIDVAYAMDYLHNDCEAPVVHCDLKPSNVLLDKDMTAKIGDFGVARLLVVKADDQQSSITNTYGLKGSIGYIPPEYGLGGKPSTRGDVYSYGVMLLELFTGRSPTHEAFTGDVSIAKWVKSSFPDNTTHVLDPDLLLLMDDVHHEGQLISSEIRQECLVSIIGVGLSCVIESPEARISMRNIVHKLKNIRDNLHKSSPGEDKI* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00104 1010 SMART serkin_6 697 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00104 1010 Gene3D Transferase(Phosphotransferase) domain 1 778 1008 - -
Eupl03g00104 1010 SUPERFAMILY Protein kinase-like (PK-like) 678 993 IPR011009 -
Eupl03g00104 1010 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 778 1005 - -
Eupl03g00104 1010 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 146 336 - -
Eupl03g00104 1010 SMART LRR_typ_2 582 607 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 437 460 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 389 413 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 558 581 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 212 235 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 116 140 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 510 534 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 461 485 IPR003591 -
Eupl03g00104 1010 SMART LRR_typ_2 164 188 IPR003591 -
Eupl03g00104 1010 ProSitePatterns Protein kinases ATP-binding region signature. 703 725 IPR017441 GO:0005524
Eupl03g00104 1010 PANTHER OS04G0122200 PROTEIN 210 999 - -
Eupl03g00104 1010 Gene3D Ribonuclease Inhibitor 23 84 IPR032675 -
Eupl03g00104 1010 Gene3D Ribonuclease Inhibitor 85 328 IPR032675 -
Eupl03g00104 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Eupl03g00104 1010 SUPERFAMILY L domain-like 366 622 - -
Eupl03g00104 1010 ProSiteProfiles Protein kinase domain profile. 697 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00104 1010 Pfam Leucine rich repeat 536 595 IPR001611 GO:0005515
Eupl03g00104 1010 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Eupl03g00104 1010 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Eupl03g00104 1010 PRINTS Leucine-rich repeat signature 464 477 - -
Eupl03g00104 1010 PRINTS Leucine-rich repeat signature 558 571 - -
Eupl03g00104 1010 Gene3D Phosphorylase Kinase; domain 1 659 777 - -
Eupl03g00104 1010 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Eupl03g00104 1010 SUPERFAMILY L domain-like 43 366 - -
Eupl03g00104 1010 FunFam Inactive leucine-rich repeat receptor-like protein kinase 337 629 - -
Eupl03g00104 1010 Gene3D Ribonuclease Inhibitor 329 630 IPR032675 -
Eupl03g00104 1010 FunFam LRR receptor-like serine/threonine-protein kinase EFR 668 777 - -
Eupl03g00104 1010 FunFam Leucine-rich repeat receptor-like kinase 28 136 - -
Eupl03g00104 1010 Pfam Protein kinase domain 699 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00104 Eupl-Chr3 2979893 2988760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00104 27 1004 Receptor kinase-like Gene Family AT3G47570 42.628 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl03g00104 Pkinase 9.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00104 - - vvi:100259050 1230.7