Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00103 ATGGGTTTCCTTGTAGTGTTCTGCATCGCTGTTGCAGCTGTTCTCTCTCCCCACTCGGTTGCTTTCGACACTCTTTCCGACAAGGCGGCCTTGCTCTCATTCAAGACTCTAATAACAGCTGACCCTTCCAACACCCTATCCACATGGAACAGCAACTTGAGTCTTTGCAATTGGACGGGAGTCACGTGTGATGAAATCAGGCAAAGAGTCGTCGGCCTAGATCTTAAGGGCCTTGGATTATCAGGCACCATTAGCCCATATCTTGCCAATCTCTCTTACCTTAATTCTCTTCAGCTACAAAAGAACCAATTTGAGGGAACCATTCCTGATCAAATAGGCGATCTTTCGCGCTTGCGTGTTCTAAACATGAGTGCAAACCTCATCCAAGGTACAATCCCACGGAACATCAGCAGATGTTCCGAGCTCATAGTCCTAGACTTAACCGGAAATGAGATCTCAGGTGTTATTCCTATAGAGCTCGGTCGTCTTTCGAAGCTCCAAGAACTAAAGATGAACAGAAACCGGCTTTCAGGCGCAATTCCTCCATCCATTGGAAACCTCTCATCACTCACTTCATTAAAATTAGCCACCAATCTTCTTAGTGGAAGCATACCAAGTGAGATAGGCCGTCTTCAAAACTTACAAAAACTCCAACTCTCCATTAACAATCTCACAGGAATTGTTCCTCTGTCCCTATACAACATTTCTTCCCTTGTCTCTATTGAATTAGCCTCAAATCAGTTATGGGGTGAAATTCCAAGTGATGTCGGCGATACGCTTCCGAATCTATTAGAAATCAATTTTGGCGTAAATGATTTCACTGGTCCATTTCCTGCATCACTACATAACCTCACCAAGATCCAAAGCATTCGGATGGAACATAATTTTCTTGTTGGATCAGTTCCACCGGGACTAGGGAATCTCCCCGACCTCAGAGTGTATGATATTGGGTTCAATCAGATCGGAAGCTCTGGCGACGCTGGACTGAATTTCATCACATCTTTGACAAACAGCACCAATCTTGAATTCCTTGCATTGGATGACAATCTTCTAGAGGGTGTGATTCCAGAATCCATTGGCAATCTTTCAACCCTTCTCACCAAATTATATATGGGTGGGAATCAGAGGATCTACGGCAATATTCCTGCTTCGATCGGTCGGCTTAGAAGCTTGGCTTTGCTAAATTTAAGCCATAATTCAGTTTCTGGTGAAATTCCATTGGCAATTGGGCAGCTCAAGGATCTACAGGTGTTGTGTTTGGCTGGAAACAAAATAGCAGGTGAAATTCCAGCCTCCTTAGGAAATCTGAGCAAATTAAATGAGCTTGAATTGTTTGGGAATGAGCTGGTGGGAAGAATACCAACCACTTTTAGTAGCTTTCAAAGCTTACTTTCGTTGGATCTATCCAAAAATAGGCTCAATGGAAGCATACCCATAGAAGTTTTCGAGCTCTCGAGTTTGAGCATTCTTCTCAACTTGTCAAAAAACTCTCTAAATGGACCTTTGCCTCAAGAAATTGGGAACTTAGAAAATATTGTCACAGTTGATCTCTCGGATAATGCCTTGTTCGGAAGCATTCCGGACTCAATCGGCAACTGTAAGAGCTTGGAGGAACTATTCATGGCCAATAATTTGTTCTCAGGCCAAATTCCTAATACTCTAGGAGAGATGAAAGGACTGGAGACTCTAGACCTCTCCTCAAACCAGCTCTCAGGTCCAATTCCTGATGATCTTCAGACACTTCAGGCCCTCCAATTCTTGAACCTCTCTTTCAATAACCTCGAAGGAGAAGTTCCGAATGATGGTGTCTTTAGAAATCTCACCAGAGTCAATCTTGAAGGAAACTCGAAGCTTTGCTTTCCTTCAGCTTGTAAGAGCAATCAAGATCGTGGAAAAATATCAATTGCAGCTCGAATTATAATTGCAACCGCAGGTTCAATAGCATTTTGTCTTCTGGTAGCTTTGTTATTATGTATTTCCTTCAACAGAAGAAAAAACTTGGCAAAGATGAAAGTGTCGTCGAACTTGTTTAAAGGGCAACATCAAATGGTTTCCTACGAAGATCTTCGAACAGCAACAGGGAATTTTGATCAGACAAATTTGATCGGAAGTGGGAGCTTCGGGTCCGTCTACAAAGGAATCCTCAGAGACGGAAGGGCCATTGCAGTGAAAGTTCTGGACCTCGGACAAACAGGAGCTTCAAAGAGCTTTTGGGCTGAATGTGAGGCTTTGAGGAATGTACGACATCGGAATCTGGTTAAACTGATTACCTCATGCTCAAGTGTCAATAACGCGAACACGGATTTTATGGCTTTGGTTTATGAATTCATGGGAAATGGGAGCTTGGAGGATTGGTGTCGAGGAAGAAGAAGGCATGCAAGTGGAAATGGGTTGAATGTTATGGAGAGGTTGAACGTGGCCATTGATGTTGCTTGTGCCATGGACTACCTGCATAACGACTGCGAAGCTCCAGTGGTGCACTGTGACCTTAAGCCAAGCAACATCCTCTTGGACAAGGACATGACTGCAAAAATAGGAGACTTTGGGGTGGCAAGGCTGCTGGTTGAGAAAGCAGGTGATCAACAATCTTCTATTACCAATACATATGGCCTCAAGGGTTCTATAGGATACATACCTCCAGAATATGGGTTTGGCGGGAAACCATCAACAAGAGGAGATGTTTACAGCTACGGTGTCATGTTGCTAGAGCTCTTTACAGGGAGGAGCCCAACCCATGAGGCTTTTACAGGGGAAGTAAGCATAGCCAAGTGGGTGAAATCAGCCTTCCCCGACAACACTATCCAAGTCCTGGACCCTGACCTGCTACTACTAATGGATCATGTCAATCATGAAGGCGGACCGATAAGTCCTGAAATTCGACAGAAATGCTTGGTATCAATCATCGGGATTGGGCTATCTTGCGTTATTGAGTCTCCTGAAGCACGCATTAGCATGAAAAACGTCGTCCACGAATTGAAGAATGTAAGAGACACTCTCCACAAGTCAAGTCCATGTCAAGATAAATTATGA 3030 0.4386 MGFLVVFCIAVAAVLSPHSVAFDTLSDKAALLSFKTLITADPSNTLSTWNSNLSLCNWTGVTCDEIRQRVVGLDLKGLGLSGTISPYLANLSYLNSLQLQKNQFEGTIPDQIGDLSRLRVLNMSANLIQGTIPRNISRCSELIVLDLTGNEISGVIPIELGRLSKLQELKMNRNRLSGAIPPSIGNLSSLTSLKLATNLLSGSIPSEIGRLQNLQKLQLSINNLTGIVPLSLYNISSLVSIELASNQLWGEIPSDVGDTLPNLLEINFGVNDFTGPFPASLHNLTKIQSIRMEHNFLVGSVPPGLGNLPDLRVYDIGFNQIGSSGDAGLNFITSLTNSTNLEFLALDDNLLEGVIPESIGNLSTLLTKLYMGGNQRIYGNIPASIGRLRSLALLNLSHNSVSGEIPLAIGQLKDLQVLCLAGNKIAGEIPASLGNLSKLNELELFGNELVGRIPTTFSSFQSLLSLDLSKNRLNGSIPIEVFELSSLSILLNLSKNSLNGPLPQEIGNLENIVTVDLSDNALFGSIPDSIGNCKSLEELFMANNLFSGQIPNTLGEMKGLETLDLSSNQLSGPIPDDLQTLQALQFLNLSFNNLEGEVPNDGVFRNLTRVNLEGNSKLCFPSACKSNQDRGKISIAARIIIATAGSIAFCLLVALLLCISFNRRKNLAKMKVSSNLFKGQHQMVSYEDLRTATGNFDQTNLIGSGSFGSVYKGILRDGRAIAVKVLDLGQTGASKSFWAECEALRNVRHRNLVKLITSCSSVNNANTDFMALVYEFMGNGSLEDWCRGRRRHASGNGLNVMERLNVAIDVACAMDYLHNDCEAPVVHCDLKPSNILLDKDMTAKIGDFGVARLLVEKAGDQQSSITNTYGLKGSIGYIPPEYGFGGKPSTRGDVYSYGVMLLELFTGRSPTHEAFTGEVSIAKWVKSAFPDNTIQVLDPDLLLLMDHVNHEGGPISPEIRQKCLVSIIGIGLSCVIESPEARISMKNVVHELKNVRDTLHKSSPCQDKL* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00103 1009 CDD STKc_IRAK 702 994 - -
Eupl03g00103 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
Eupl03g00103 1009 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Eupl03g00103 1009 ProSiteProfiles Protein kinase domain profile. 696 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00103 1009 SUPERFAMILY Protein kinase-like (PK-like) 677 992 IPR011009 -
Eupl03g00103 1009 Gene3D Phosphorylase Kinase; domain 1 658 776 - -
Eupl03g00103 1009 Pfam Protein kinase domain 698 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00103 1009 FunFam Leucine-rich repeat receptor-like protein kinase TDR 61 327 - -
Eupl03g00103 1009 Pfam Leucine rich repeat 535 594 IPR001611 GO:0005515
Eupl03g00103 1009 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Eupl03g00103 1009 Gene3D Ribonuclease Inhibitor 327 629 IPR032675 -
Eupl03g00103 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 333 993 - -
Eupl03g00103 1009 SMART LRR_typ_2 115 139 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 388 412 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 436 459 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 211 234 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 460 484 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 557 580 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 163 187 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 509 533 IPR003591 -
Eupl03g00103 1009 SMART LRR_typ_2 581 606 IPR003591 -
Eupl03g00103 1009 ProSiteProfiles Leucine-rich repeat profile. 213 234 IPR001611 GO:0005515
Eupl03g00103 1009 SMART serkin_6 696 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00103 1009 Gene3D Ribonuclease Inhibitor 85 326 IPR032675 -
Eupl03g00103 1009 Gene3D Ribonuclease Inhibitor 22 84 IPR032675 -
Eupl03g00103 1009 SMART LRR_sd22_2 557 580 - -
Eupl03g00103 1009 SMART LRR_sd22_2 412 438 - -
Eupl03g00103 1009 SMART LRR_sd22_2 338 364 - -
Eupl03g00103 1009 SMART LRR_sd22_2 163 189 - -
Eupl03g00103 1009 SMART LRR_sd22_2 460 481 - -
Eupl03g00103 1009 SMART LRR_sd22_2 211 232 - -
Eupl03g00103 1009 SMART LRR_sd22_2 115 138 - -
Eupl03g00103 1009 SUPERFAMILY L domain-like 365 621 - -
Eupl03g00103 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 328 629 - -
Eupl03g00103 1009 SUPERFAMILY L domain-like 24 320 - -
Eupl03g00103 1009 Gene3D Transferase(Phosphotransferase) domain 1 777 1007 - -
Eupl03g00103 1009 PRINTS Leucine-rich repeat signature 463 476 - -
Eupl03g00103 1009 PRINTS Leucine-rich repeat signature 557 570 - -
Eupl03g00103 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 777 1004 - -
Eupl03g00103 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 667 776 - -
Eupl03g00103 1009 ProSitePatterns Protein kinases ATP-binding region signature. 702 724 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00103 Eupl-Chr3 2973925 2978106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00103 21 1003 Receptor kinase-like Gene Family AT3G47570 42.530 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl03g00103 Pkinase 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00103 - - nnu:104612143 1233.01