Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g00070 | ATGATGAAACTTTCGCACTTCGTAATGTCCAGGAGTGCTGTGTCTGAGAAACTATTATTGGGGAAAGTTAGTAATATCAGAGATCCTTTATGGTCACATAGCTTTATAACTCGGGCTGGGATTTCCACTTCTGGACTGGACCTGGCCACTGATGGGACTAAGTCGAGCAGAATATTTGCTGAGTATACTCTTTTCAAGGGCAAAGCTGCCCTTTCTATGTCCCCTATTCTTCCAAAGTTCAGTAAGAATGATTATGGGAGTTTAAAAGTTAATAAAAGGGGTTGTATAATATTGAATTTCTGGCCTGCTGTTGGTGAACGCAAGTACGATTGGCAAAAGAAGCAGGCATTTGCTTTATCAGCTACAGAGCTTGGGTCTTTGATAAGCCTTGGACCTGCCAAATCTTGCGAATTTTTTCACGATCCTTCAATGAAAACTAGTAATGCAGGTCAAGTTAGAAAGAGTTTATCAGTTACGCCACTCTCTGATGATAATGGCTATTTCTTTACTCTGACTGTTGCCAATACTGTCCAGAAAACCAATGAACGATTTTCTGTTCCTGTGACAACGTCGGAGTTTACAGTGATGCGCACGGCTTTCAGTTTCATCCTGCCGCACATCATGGGTTGGGATCAATTCTCCAATCAGTCGCCAGTAAGCACTGACATGAAATCGGTGGGGCAGCCGGAGTTGCAGCTAAGCCCAAATTTAGAATGGGATAGATGA | 726 | 0.427 | MMKLSHFVMSRSAVSEKLLLGKVSNIRDPLWSHSFITRAGISTSGLDLATDGTKSSRIFAEYTLFKGKAALSMSPILPKFSKNDYGSLKVNKRGCIILNFWPAVGERKYDWQKKQAFALSATELGSLISLGPAKSCEFFHDPSMKTSNAGQVRKSLSVTPLSDDNGYFFTLTVANTVQKTNERFSVPVTTSEFTVMRTAFSFILPHIMGWDQFSNQSPVSTDMKSVGQPELQLSPNLEWDR* | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g00070 | 241 | MobiDBLite | consensus disorder prediction | 218 | 241 | - | - | |
Eupl03g00070 | 241 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 22 | 241 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Eupl03g00070 | 241 | Pfam | Whirly transcription factor | 65 | 198 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Eupl03g00070 | 241 | MobiDBLite | consensus disorder prediction | 218 | 232 | - | - | |
Eupl03g00070 | 241 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 48 | 221 | IPR009044 | GO:0003677|GO:0006355 | |
Eupl03g00070 | 241 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 56 | 240 | IPR009044 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g00070 | Eupl-Chr3 | 2017382 | 2035108 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g00070 | 1 | 241 | Whirly Transcription Factor Family | AT1G71260 | 51.429 | 1.31e-79 | 237 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Whirly | Eupl03g00070 | Whirly | 2.3e-57 | CL0609 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g00070 | K26561 | - | nnu:104608298 | 299.286 |