Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00070 ATGATGAAACTTTCGCACTTCGTAATGTCCAGGAGTGCTGTGTCTGAGAAACTATTATTGGGGAAAGTTAGTAATATCAGAGATCCTTTATGGTCACATAGCTTTATAACTCGGGCTGGGATTTCCACTTCTGGACTGGACCTGGCCACTGATGGGACTAAGTCGAGCAGAATATTTGCTGAGTATACTCTTTTCAAGGGCAAAGCTGCCCTTTCTATGTCCCCTATTCTTCCAAAGTTCAGTAAGAATGATTATGGGAGTTTAAAAGTTAATAAAAGGGGTTGTATAATATTGAATTTCTGGCCTGCTGTTGGTGAACGCAAGTACGATTGGCAAAAGAAGCAGGCATTTGCTTTATCAGCTACAGAGCTTGGGTCTTTGATAAGCCTTGGACCTGCCAAATCTTGCGAATTTTTTCACGATCCTTCAATGAAAACTAGTAATGCAGGTCAAGTTAGAAAGAGTTTATCAGTTACGCCACTCTCTGATGATAATGGCTATTTCTTTACTCTGACTGTTGCCAATACTGTCCAGAAAACCAATGAACGATTTTCTGTTCCTGTGACAACGTCGGAGTTTACAGTGATGCGCACGGCTTTCAGTTTCATCCTGCCGCACATCATGGGTTGGGATCAATTCTCCAATCAGTCGCCAGTAAGCACTGACATGAAATCGGTGGGGCAGCCGGAGTTGCAGCTAAGCCCAAATTTAGAATGGGATAGATGA 726 0.427 MMKLSHFVMSRSAVSEKLLLGKVSNIRDPLWSHSFITRAGISTSGLDLATDGTKSSRIFAEYTLFKGKAALSMSPILPKFSKNDYGSLKVNKRGCIILNFWPAVGERKYDWQKKQAFALSATELGSLISLGPAKSCEFFHDPSMKTSNAGQVRKSLSVTPLSDDNGYFFTLTVANTVQKTNERFSVPVTTSEFTVMRTAFSFILPHIMGWDQFSNQSPVSTDMKSVGQPELQLSPNLEWDR* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00070 241 MobiDBLite consensus disorder prediction 218 241 - -
Eupl03g00070 241 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 22 241 IPR013742 GO:0003697|GO:0006355|GO:0006952
Eupl03g00070 241 Pfam Whirly transcription factor 65 198 IPR013742 GO:0003697|GO:0006355|GO:0006952
Eupl03g00070 241 MobiDBLite consensus disorder prediction 218 232 - -
Eupl03g00070 241 Gene3D Transcriptional Coactivator Pc4; Chain A 48 221 IPR009044 GO:0003677|GO:0006355
Eupl03g00070 241 SUPERFAMILY ssDNA-binding transcriptional regulator domain 56 240 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00070 Eupl-Chr3 2017382 2035108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00070 1 241 Whirly Transcription Factor Family AT1G71260 51.429 1.31e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Eupl03g00070 Whirly 2.3e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00070 K26561 - nnu:104608298 299.286