Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00052 ATGGCTTCTCTCGCAGCATCGACTGCCTCGGCGTCATTAGGCGTCTCAGAGATGCTTGGAAACCCCCTCAATTTTACCGTCGCTGCCCGGTCAGCTCCCTCGGCATCGAACCCAGCCACATTCAAGACCGTCGCGCTCTTTTCAAAGAAGAAGCCGGCACCACCCCCCAAATCAAAGGCCGTCTCTCCGGCCGACGAAGAGCTCGCCAAGTGGTACGGTCCTGACAGAAGGATTTTCTTGCCGGAAGGGCTCTTGGACCGATCGGACGTACCGGAGTACCTCACCGGAGAAGTTCCTGGAGATTATGGTTATGATCCTTTTGGACTGAGCAAGAAACCTGAAGACTTCAGCAAGTACCAGGCGTATGAGCTCATTCACGCTCGATGGGCCATGCTCGGTGCCGCTGGGTTCATCATCCCTGAGGCCTTCAACAAATTCGGTGCCAGCTGCGGTCCCGAAGCTGTTTGGTTCAAGACCGGAGCTCTACTCCTTGATGGCAACACACTGAATTACTTTGGAAAGAACATCCCAATCAACCTTGTTTTGGCCGTCGTTGCCGAGGTTGTTCTTGTTGGCGGTGCCGAATATTACAGAATTATCAATGGCTTGAACTTGGAGGACAAGCTTCATCCTGGTGGTCCATTCGATCCGTTGGGGCTTGCAAATGATCCAGACCAGGCAGCATTGCTGAAGGTGAAGGAGATTAAGAATGGAAGACTTGCGATGTTCGCCATGCTTGGTTTCTTCATCCAGGCTTATGTGACAGGTAAAGGCCCAGTTGAAAACCTCGCAGCCCATCTCAGCGACCCTTTCGGTAACAACCTGCTCACCGTGATTTCGGGATCTGTAGAACGATCTCCTACCCTGTGA 870 0.5287 MASLAASTASASLGVSEMLGNPLNFTVAARSAPSASNPATFKTVALFSKKKPAPPPKSKAVSPADEELAKWYGPDRRIFLPEGLLDRSDVPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGASCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLVGGAEYYRIINGLNLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLTVISGSVERSPTL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00052 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Eupl03g00052 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
Eupl03g00052 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 28 280 IPR001344 GO:0009765|GO:0016020
Eupl03g00052 289 SUPERFAMILY Chlorophyll a-b binding protein 70 279 - -
Eupl03g00052 289 FunFam Chlorophyll a-b binding protein, chloroplastic 78 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00052 Eupl-Chr3 1544232 1548665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00052 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 83.929 6.66e-153 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00052 K08916 - ming:122067850 517.309