Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00041 ATGGAGGCAAGTGCTAGCGATTCTAGTCTTCTTCTTCAAGAGCCAAAACTGAAGCTCTACTCGTACTTTCGGAGCTCGTGTTCGTTCCGCGTTCGTATTGCCCTCAACTTGAAAGGGTTGAACTACGAGTACAAGGCAGTCAACCTGGTGAAAGGAGAGCAGTTCAGTCCAGAGTTCTCAAAGCTGAACCCCATTAGTTATGTGCCGGTATTGGTGGATGAGGACGTAGTAATTGCTGACTCTTTCGCCATCTTACTATACTTGGAAGAAAAGTATCCTCAGCATCCACTTTTGCCTCATGATCTTCAGAAAAAAGCTATCAATTTCCAGGCTGCAAATATTGTTTGCTCAAGCATACAGCCACTTCAGAATCTTGACGTTCTGAAATACATTAAGGAAAAAGTGAGTTCTGATGAGCAGCTTGCTTGGGCTCAATATCATATAGGAAAAGGCTTCACAGCACTTGAGAAGCTGTTAAAAGGCTATGCTGGAAAATACGCTACAGGGGATGAAGTCTTCCTGGCAGATTTGTTTCTAGCGCCCCAGATTTATGCAGGGATCACACGATTCAAAATTGACATGACTCAGTTCCCGCTTCTATCCAGCCTCAATGAGGCATACAATGCGCTGCCAGCATTCCAAGCTGCTATGCCAGAAAATCAGCCGGATTGCATGAAACCATAG 684 0.4474 MEASASDSSLLLQEPKLKLYSYFRSSCSFRVRIALNLKGLNYEYKAVNLVKGEQFSPEFSKLNPISYVPVLVDEDVVIADSFAILLYLEEKYPQHPLLPHDLQKKAINFQAANIVCSSIQPLQNLDVLKYIKEKVSSDEQLAWAQYHIGKGFTALEKLLKGYAGKYATGDEVFLADLFLAPQIYAGITRFKIDMTQFPLLSSLNEAYNALPAFQAAMPENQPDCMKP* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00041 227 Pfam Glutathione S-transferase, N-terminal domain 16 89 IPR004045 -
Eupl03g00041 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 227 IPR010987 -
Eupl03g00041 227 FunFam Glutathione S-transferase Z1 15 99 - -
Eupl03g00041 227 NCBIfam maleylacetoacetate isomerase 18 224 IPR005955 GO:0003824|GO:0005737|GO:0009072
Eupl03g00041 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Eupl03g00041 227 CDD GST_N_Zeta 17 89 IPR034333 -
Eupl03g00041 227 PANTHER MALEYLACETOACETATE ISOMERASE 17 224 - -
Eupl03g00041 227 Gene3D Glutaredoxin 15 99 - -
Eupl03g00041 227 FunFam Maleylacetoacetate isomerase 100 227 - -
Eupl03g00041 227 Gene3D - 100 226 - -
Eupl03g00041 227 SUPERFAMILY Thioredoxin-like 14 99 IPR036249 -
Eupl03g00041 227 SUPERFAMILY GST C-terminal domain-like 96 223 IPR036282 -
Eupl03g00041 227 SFLD Main (cytGST) 17 200 - -
Eupl03g00041 227 SFLD Glutathione Transferase (cytosolic) 17 200 IPR040079 -
Eupl03g00041 227 CDD GST_C_Zeta 102 221 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00041 Eupl-Chr3 1242767 1265752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00041 14 224 Glutathione S-transferase Gene Family AT2G02380 61.137 1.13e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00041 K01800 - nnu:104593872 350.517