Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00036 ATGGGTGGCGATGAAAATGATCATGTTACTACTCAAGTCAAGGGGACAATGGGCTACTTCGATCCTGAATATTACATGACCCAACAATTGACTGAAAAGAGTGACGTTTATAGCTTTGGGGTGCTAATGTTGGAGCTGATAACTGCAAAGAGGCCAATAGAACGAGGGAGATACATTGTAAGAGAGGTGATACTGGCAATGGATAAGAAACAAAATCTATATGGTCTTCATGAGCTTCTTGATCCAACCATTGGATTGGGCACCACCCTTGGAGGATTTGAGAAGTTTGTGGATCTGGCAATGAGGTGTGTTGAAGAATCTAGAGCAAACCGGCCTACAATGAGTGAGGTGGTGAAAGAGATCGAGAGCATAATGCAGCTGGCTGGTTTGAACCCAAATGCTAAATCTGCATCAACGTGA 420 0.4357 MGGDENDHVTTQVKGTMGYFDPEYYMTQQLTEKSDVYSFGVLMLELITAKRPIERGRYIVREVILAMDKKQNLYGLHELLDPTIGLGTTLGGFEKFVDLAMRCVEESRANRPTMSEVVKEIESIMQLAGLNPNAKSAST* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00036 139 Pfam Protein tyrosine and serine/threonine kinase 5 120 IPR001245 GO:0004672|GO:0006468
Eupl03g00036 139 Gene3D Transferase(Phosphotransferase) domain 1 1 135 - -
Eupl03g00036 139 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00036 139 SUPERFAMILY Protein kinase-like (PK-like) 8 126 IPR011009 -
Eupl03g00036 139 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00036 Eupl-Chr3 1059536 1060589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00036 1 139 Receptor kinase-like Gene Family AT5G49760 67.857 2.61e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Eupl03g00036 PK_Tyr_Ser-Thr 2.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00036 - - nnu:104593886 232.646