Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00032 ATGGCAATTGCGGCAGCCATGAGCCACGACAACGATAAAGACGACCATGAACATGACATGGTGATGCCCGGATTCCGTTTCCATCCTACTGAGGAAGAACTCGTCGAATTCTACCTCCGTCGCAAAGTCGAAGGCAAGCGCTTCAATGTCGAACTAATAACCTTCCTCGATCTGTATCGCTACGACCCATGGGAGCTTCCTGCATTGGCAGCAATTGGAGAGAAGGAATGGTTCTTCTATGTGCCTCGAGACCGAAAGTATCGGAACGGCGATCGACCTAACCGTGTGACTACTTCAGGCTACTGGAAGGCTACTGGCGCCGACCGGATGATCAGAACTGAGAGCTTTAGGTCAATTGGGCTTAAGAAGACCCTGGTCTTCTACTCTGGGAAGGCTCCTAAAGGCATTAGAACCAGTTGGATCATGAACGAGTACCGTTTACCGCAACACGATACTGATCGGTACCAAAAGGCGGAAATTTCACTTTGCCGAGTCTACAAGAGAGCTGGAGTAGAAGACCACTGCCCACTCCCTAGTTCCCTTCCTTCCAGTAGGCCATCCTCATCAAGAGGAATCCAATCAGATAGAAAACAGCGAAACATGGTTCATCTCGCGACAGCAAGCTTCGAAGGACATTCGTCGCCAACCGACATAAAGAAGTTGCATGAAGGAGATGGAAGCAGTAGCGCGGATGCCGGAACTGCTCTTGGGCTAGCCAATCATACAGTTTACAGTGCAATAGCTCCAAGAACTTCCACACTATCACTGGCTTCAGTTGAAGAGGATGGTACACTCCTACACCATTCGAAGCAAGTGGACTCTCTACTGCCAACCTGCACGACACTCTTCACTTGCTCTTCTTCTATGCCTGTAGCTGCAATGGATGAGCTCCATAGATTGGTAGACTATCAACAAGCTTATACGCAACAGCAACAACAACATAATCATCATCACCATCCAACCCAATTCCTGCCGTTACCGTCCCAATCGCAGTCGATAGCATTCAACACCCTACCCACTTCGCTGCCAACCTTCTCCGACAAGCTCTGGGAGTGGAATCCCATCCCAGAGGCTAACAGAGGTTACACTAGTCCTTTTAAATAA 1104 0.4918 MAIAAAMSHDNDKDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTESFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHDTDRYQKAEISLCRVYKRAGVEDHCPLPSSLPSSRPSSSRGIQSDRKQRNMVHLATASFEGHSSPTDIKKLHEGDGSSSADAGTALGLANHTVYSAIAPRTSTLSLASVEEDGTLLHHSKQVDSLLPTCTTLFTCSSSMPVAAMDELHRLVDYQQAYTQQQQQHNHHHHPTQFLPLPSQSQSIAFNTLPTSLPTFSDKLWEWNPIPEANRGYTSPFK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00032 367 FunFam NAC domain-containing protein 35 30 171 - -
Eupl03g00032 367 Gene3D NAC domain 30 171 IPR036093 GO:0003677|GO:0006355
Eupl03g00032 367 ProSiteProfiles NAC domain profile. 21 168 IPR003441 GO:0003677|GO:0006355
Eupl03g00032 367 MobiDBLite consensus disorder prediction 180 213 - -
Eupl03g00032 367 SUPERFAMILY NAC domain 21 167 IPR036093 GO:0003677|GO:0006355
Eupl03g00032 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 306 - -
Eupl03g00032 367 MobiDBLite consensus disorder prediction 175 233 - -
Eupl03g00032 367 Pfam No apical meristem (NAM) protein 23 147 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00032 Eupl-Chr3 1012685 1014795 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00032 20 367 NAC Transcription Factor Family AT2G02450 49.357 2.37e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl03g00032 NAM 9.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00032 - - nnu:104593891 525.398