Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01467 ATGGGCCATAACTGCTGCAGCAAACTGAAAGTTAAGAGGGGGTTGTGGTCACCTGAGGAGGATGAGAAGCTCATCAGATACATCACCACCTATGGCCATGGTTGTTGGAGTTCTGTTCCAAAACTAGCAGGACTTCAGAGATGTGGAAAAAGTTGCAGACTGAGATGGATTAACTACTTAAGACCAGACCTCAAGAGGGGTTCTTTTTCTGCACAAGAAGAACGAATCATCATCAATGTTCATAGAATCCTAGGCAACAGATGGGCTCAGATAGCTAAGCATCTACCAGGAAGAACAGACAATGAAGTGAAGAACTTTTGGAACTCATGCATTAAGAAAAAACTTATTGCACAGGGGTTGGACCCAAAAACTTACAATCTGCTCCCTTCTTGTCATCAACCCACTTCAGTTATCTCTATGAATTCACATTCTCCTACATTTTATGAATCGATGACCATCCCCACCTGCCAAAACCCTCAACTACTATGGAATGTTAAAGATCAAAACTTGCATGCTTCATCAATTGATTTCTCACCTTCTTCAATTTCTGCATCTGGGTCTGGTTTTTTAGATGAGAATTGCTTGTGGGGTGGTGTTAAATCCTTAGATGAACACCCAAGAAAGGAAGAAATGGAATCACAGAAGATGGAGGTGTGTGAAGTTGATGAGGTCGATGAAGGCAATGAAGTGAAGGGTGGTCAGGACATGGAGACTTCGCTCAATGGTTTTTCTAGTTTCGATCTTGAGTTCTTGGATTCTACAATGATGGCTTGTGGAATGTATTGCAATGTGAGCTCCATGGATCAGTTTGCATGGGATTGTTAG 825 0.4206 MGHNCCSKLKVKRGLWSPEEDEKLIRYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSAQEERIIINVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDPKTYNLLPSCHQPTSVISMNSHSPTFYESMTIPTCQNPQLLWNVKDQNLHASSIDFSPSSISASGSGFLDENCLWGGVKSLDEHPRKEEMESQKMEVCEVDEVDEGNEVKGGQDMETSLNGFSSFDLEFLDSTMMACGMYCNVSSMDQFAWDC* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01467 274 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Eupl02g01467 274 Gene3D - 10 66 - -
Eupl02g01467 274 SMART sant 65 113 IPR001005 -
Eupl02g01467 274 SMART sant 12 62 IPR001005 -
Eupl02g01467 274 FunFam Myb transcription factor 10 66 - -
Eupl02g01467 274 CDD SANT 68 108 IPR001005 -
Eupl02g01467 274 Gene3D - 68 115 - -
Eupl02g01467 274 PANTHER MYB DOMAIN PROTEIN 55 1 204 - -
Eupl02g01467 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Eupl02g01467 274 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Eupl02g01467 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Eupl02g01467 274 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Eupl02g01467 274 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Eupl02g01467 274 FunFam Myb transcription factor 68 115 - -
Eupl02g01467 274 CDD SANT 16 60 IPR001005 -
Eupl02g01467 274 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01467 Eupl-Chr2 33049007 33050080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01467 1 130 MYB Transcription Factor Family AT3G12720 85.385 5.70e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl02g01467 Myb_DNA-binding 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01467 K09422 - nnu:104599779 367.466