Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01463 ATGGAGATGCAGATGGAGCAGCTACTGAACATGGGTTTCCCTCAGGAGTTGGCTTCTCAAGCGTTAGCAGCCACCGGAGGCAAATCGACCCTCAAAGCCACCGAATGGATCCTCAGCCACAAACCTAACGTTCCTAACCCTAATCCCAACCTCAACCTCAACCTCAACCCCAACCCTAACCCTAGTCCTAGTCCCTTCCAGCCCAGACTCGACCGCTTCTTCCATTCCAAACGTCCTTCCCCCCAAATCCGAAGAAACGGAATCGACGGCACCCCAGAAGCCATCACCATCGTCGAAAAACAATCAGACGAAGAAGAAGAATCTCTCCCCAAGCGTCCCAAGTTGTGGTCATCCCAACAGTCATCATACCGTCCACATTCACAGAAACCCCATGAACCTTTATCGGAGCGAATGCGCCCTCGTAGCATCGATGAGGTCGTCGGACAAGATCACCTTCTTGGGAAGAATTCAGTTCTTCGATCTTCGTTAGATTGCGATCGCCTACCTTCGATCGTGTTTTGGGGTCCACCAGGCACTGGTAAGACCTCAATTGCTAAGGCGATTGCCAATTCAGCTCCCGTGTCATACCGATTCGTTTCTTTGTCAGCTGTAACTGCTGGGGTTAAGGATGTTAGAGATGCCGTTGAAGAAGCGAGAAAAATGAAGAAAAAGAATAAGCGGACTGTGTTGTTTGTCGACGAGGTTCACAGGTTTAATAAATCACAGCAGGACTCGTTCTTGCCGGTAATTGAAGATGGGAGTGTTGTGTTTATGGGGGCGACGACTGAGAACCCGTCTTTCCATTTGATCACCCCATTGTTGTCGCGGTGCAGGGTCCTCACGCTGAATTCGCTGCAGCCTGAAAGCATTGTGAGACTACTCAAGCGGGCGGCTGATGATGCAGAGAGGGGATTGGCCCGGAGTGTTGGGTTTAGTGTGGTAGTGGAGGAGGAATCTTTCGATTTTCTATCCTTGAATTCTGACGGTGATGCCCGGGTGGCATTGAATGCTTTGGAGATCGCTGCGATGACAGCCACAGCTCGAAGGCTTGGTGGGCATTCCTCTATAGAAGAAGGGACGTTGGCTTCTCGGGTTAGACCAATTGAGTGTCCATCTTCTGATGCAACTGGTATGGCCGGTGGTGATGACAATGGTGCGGTTTTGGAAACTGAGGAAAATGGGGAATCTGTAGCCATTGTCACTCTAGATGATGCTAAAGAAGCTCTCCAATGTAAGCACCTTGCCTATGACCGAGCTGGGGAAGAACACTATAACCTCATCAGTGCCCTCCATAAATCAATGAGGGGGAGCGATGCCGACGCAGCAATTTACTGGCTGGCGAGAATGTTAGAAGGAGGGGAACAGCCTCTCTACATTGCTCGACGGCTCATCAGGTTCGCGAGCGAGGACGTTGGATTGGCTGACTCAAGTGCAGTCAGTCAAGCTGTGGCTTGCTACCAGGCTTGCCATTTTTTGGGCATGCCCGAGTGCAATGTGAACCTTGCACAATGTGTCGCCTACTTGGCTTTGGCTCCTAAATCTGTTGCTGTTTACAATGCGATAGAGGCGGCCCAAAAGGTGGTGAAGGAATCAGTAGGACAGAATGAGGGGGTGCCTCTTCATCTGAGGAATGCACCGACGAAGCTGATGAAGGACCTTGGGTATGGGAAGGGCTACATTTACCCTCCCAACAACCCATTCTCTTTGTCGTCACAGAGTTATCTGCCTCCTTCACTACAAGGTGATCACGAGTCTGTACACCTAACCTTGGTTGCTTTCAGATTTTGA 1788 0.5056 MEMQMEQLLNMGFPQELASQALAATGGKSTLKATEWILSHKPNVPNPNPNLNLNLNPNPNPSPSPFQPRLDRFFHSKRPSPQIRRNGIDGTPEAITIVEKQSDEEEESLPKRPKLWSSQQSSYRPHSQKPHEPLSERMRPRSIDEVVGQDHLLGKNSVLRSSLDCDRLPSIVFWGPPGTGKTSIAKAIANSAPVSYRFVSLSAVTAGVKDVRDAVEEARKMKKKNKRTVLFVDEVHRFNKSQQDSFLPVIEDGSVVFMGATTENPSFHLITPLLSRCRVLTLNSLQPESIVRLLKRAADDAERGLARSVGFSVVVEEESFDFLSLNSDGDARVALNALEIAAMTATARRLGGHSSIEEGTLASRVRPIECPSSDATGMAGGDDNGAVLETEENGESVAIVTLDDAKEALQCKHLAYDRAGEEHYNLISALHKSMRGSDADAAIYWLARMLEGGEQPLYIARRLIRFASEDVGLADSSAVSQAVACYQACHFLGMPECNVNLAQCVAYLALAPKSVAVYNAIEAAQKVVKESVGQNEGVPLHLRNAPTKLMKDLGYGKGYIYPPNNPFSLSSQSYLPPSLQGDHESVHLTLVAFRF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01463 595 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 3 582 - -
Eupl02g01463 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 346 IPR027417 -
Eupl02g01463 595 Gene3D - 285 361 - -
Eupl02g01463 595 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 40 IPR015940 -
Eupl02g01463 595 FunFam Replication-associated recombination protein A 125 284 - -
Eupl02g01463 595 Gene3D - 1 52 - -
Eupl02g01463 595 Gene3D - 410 513 - -
Eupl02g01463 595 MobiDBLite consensus disorder prediction 98 112 - -
Eupl02g01463 595 FunFam Putative AAA family ATPase 410 513 - -
Eupl02g01463 595 SUPERFAMILY post-AAA+ oligomerization domain-like 420 582 IPR008921 GO:0003677|GO:0006260
Eupl02g01463 595 MobiDBLite consensus disorder prediction 41 140 - -
Eupl02g01463 595 Pfam AAA C-terminal domain 313 435 IPR032423 -
Eupl02g01463 595 SUPERFAMILY UBA-like 4 49 IPR009060 GO:0005515
Eupl02g01463 595 Pfam MgsA AAA+ ATPase C terminal 436 581 IPR021886 -
Eupl02g01463 595 CDD HLD_clamp_RarA 285 363 - -
Eupl02g01463 595 SMART uba_6 1 39 IPR015940 -
Eupl02g01463 595 Pfam ATPase family associated with various cellular activities (AAA) 171 279 IPR003959 GO:0005524|GO:0016887
Eupl02g01463 595 CDD AAA 147 278 - -
Eupl02g01463 595 Gene3D - 514 586 - -
Eupl02g01463 595 Gene3D - 123 284 IPR027417 -
Eupl02g01463 595 MobiDBLite consensus disorder prediction 52 66 - -
Eupl02g01463 595 MobiDBLite consensus disorder prediction 113 128 - -
Eupl02g01463 595 SMART AAA_5 167 285 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01463 Eupl-Chr2 33015373 33024575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01463 106 345 Core DNA Replication Machinery Family AT1G77470 26.104 6.18e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01463 K07478 - nnu:104599770 830.861