Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01455 ATGTTCCATTCCAAGAAGCCAACTATGAATTCAAATGATAGATCTGTGTGTGTGCAAGGGGATTCTGGGCTTGTCCTTACAACAGACCCAAAGCCCCGCCTCCGATGGACCCAAGAACTTCACGACAGATTCGTCGATGCCGTCGCTCAGCTTGGAGGACCAGATAAGGCTACACCAAAAACCATCATGAGAGCTATGGGTGTCAAGGGTCTTACTCTATACCATCTCAAGAGCCACCTTCAGAAATTCAGGCTTGGCAAGCAACCACAAAAAGACTTCAATGATCACTCAATTAAGGATGCTTCAGCATTAGATCTGCAAAGAAATGCTGCTTCTTCGTCTGGGATAATGGATCGAAGTATGAACGACAGGAGCGTACATCTCAACGAGGCACTTAGGATGCAAATGGAAGTACAAAGGAGATTGCATGAACATTTGGAGGTACAAAGACACCTTCAAATGAGGATTGAAGCTCAAGGAAAATATATGCAGAATATATTGGAAAAAGCTTGCCAAACACTTGCCGGCGAAAATATGGCCTCAGGAAGTTACAAGGATGTTGATAATCAAGTAGCAGTTGATATTGCTTCTGTAAATTTTCCTTCTCTTCTGGACCTACACTTGTATGGTGGAGACCAATTAGATGTGCAACAACAGATTGATAGATCATCTCTTGATGGGCTTTTGCCAAACAATGACAATGTTTGTGGCCTAGGGAAGAAGAAGCCTAATCCATTTGGTAATAGTAGCAAGAGCCCTTTAATATGGGCTGATGATAACAGACTACAAGAGTTGGGTACAGCAACAGCATGTCTAGGTTCTCAAGAGGATTCTTTCAAGGCTGACCTGCTTCAAATTGCAACACCGGCGATTTACAGTGGCGTTGATATGGATCCCATAGGAGATCTTTATGAAAAGAAGCCAATTCTTGCCAGCGAAAGTGTGGGGGGAAAGAAAATGGAAGCTTCGGCGAAGTTCGAAAGGCCATCTCTGCGAAGAACACAGCTTCATGTTGATAGGATTAACCCCATGATCAAGGGTGGTGCTGTATCACAAGGAAAGAATTTACCTTATGGGTGA 1080 0.4361 MFHSKKPTMNSNDRSVCVQGDSGLVLTTDPKPRLRWTQELHDRFVDAVAQLGGPDKATPKTIMRAMGVKGLTLYHLKSHLQKFRLGKQPQKDFNDHSIKDASALDLQRNAASSSGIMDRSMNDRSVHLNEALRMQMEVQRRLHEHLEVQRHLQMRIEAQGKYMQNILEKACQTLAGENMASGSYKDVDNQVAVDIASVNFPSLLDLHLYGGDQLDVQQQIDRSSLDGLLPNNDNVCGLGKKKPNPFGNSSKSPLIWADDNRLQELGTATACLGSQEDSFKADLLQIATPAIYSGVDMDPIGDLYEKKPILASESVGGKKMEASAKFERPSLRRTQLHVDRINPMIKGGAVSQGKNLPYG* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01455 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 191 IPR044848 GO:0003700
Eupl02g01455 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 31 86 IPR006447 GO:0003677
Eupl02g01455 359 FunFam Myb family transcription factor 30 88 - -
Eupl02g01455 359 SUPERFAMILY Homeodomain-like 30 86 IPR009057 -
Eupl02g01455 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 88 IPR017930 -
Eupl02g01455 359 Gene3D - 30 88 - -
Eupl02g01455 359 Pfam MYB-CC type transfactor, LHEQLE motif 127 173 IPR025756 -
Eupl02g01455 359 Pfam Myb-like DNA-binding domain 34 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01455 Eupl-Chr2 32903993 32905919 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01455 1 359 G2-like Transcription Factor Family AT1G79430 51.289 5.53e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl02g01455 Myb_DNA-binding 4.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01455 - - pda:103721455 516.153