Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01453 ATGTTCCATTCCAAGAAGACTACTATGAATTCAAATGATAGAGCTGTGTGTGTGCAAGGGGATTCTGGGCTTGTCCTTACAACAGACCCAAAGCCCCGCCTTAGATGGACCCAAGAACTTCACGACAGATTCGTCGATGCCGTCGCTCAGCTTGGAGGACCAGATAAGGCCACTCCAAAAACCATCATGAGAACTATGGGTGTCAAGGGTCTTACTCTATACCATCTCAAAAGCCACCTTCAGAAATTCAGGCTTGGCAAACAACCACAGAAAGAATTTAATGATCAATCCACTCAGGATGGTGAGAGAGCTTTGGCACTAGATCTGCGAAGAAATGCTGCTTCGTCGTCTGGGATAATGGGTCGAAGTATGAACGAGAACGTGCACATCACCGAGGCACTTAGGATGCAAATGGAAGTAGGAAGGAGATTGCACGAACAATTAGAGGTACAAAAACACCTTCAATTGAGGATTGAAGCTCAAGGAAAGTACATGCAAAATATACTGGAAAAAGCTTGTGAAACACTTTCGGGTGAAAACATGGCCTCAGGAAGCTACAAGGGTGCCGATGATCAAGTAACTGTTGATATGAGTAACATGAAAAATATCGGTTCATTGAATTTTCCTTCTCTTCAGGATCTACACTTATCCAGAGGAGACCAATTCGATATGCAGCAACAGATTGATAGATCATCTCTTGATGGGTTTCTGCCAAACAATGAAAACCTTTGTCTAGGGACGAAGAGGCCTAATCCATATGGTAGTACTACAAAGAGCCATTTAACATGGAATGATGATAACAGACTACAGGAGTTGGGAACAGCAGCAGCCTGTCTAGGTCCTCAAGAGGATTGTTTCAAGGGTGCCAAACTTCCAATTGCAGCATCGACGATTCACAGCGGCGGTGATATGGATTCCATCGGAGATCTTTACGAAATGAAACCACACCTTGCAGGTGAAAGTGTGGGGGGAGAGACACTTGAGGCTTCAGGAAAGCTCGGTAGACCATCTCTGCAAAGAGCACAGCTTCATGTAGATAGGATTAGCCCCATGATCAAGGGTGGTGCTTTACCACAAGTAAGAAATTTGCGTTATGGGTGA 1101 0.4469 MFHSKKTTMNSNDRAVCVQGDSGLVLTTDPKPRLRWTQELHDRFVDAVAQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKFRLGKQPQKEFNDQSTQDGERALALDLRRNAASSSGIMGRSMNENVHITEALRMQMEVGRRLHEQLEVQKHLQLRIEAQGKYMQNILEKACETLSGENMASGSYKGADDQVTVDMSNMKNIGSLNFPSLQDLHLSRGDQFDMQQQIDRSSLDGFLPNNENLCLGTKRPNPYGSTTKSHLTWNDDNRLQELGTAAACLGPQEDCFKGAKLPIAASTIHSGGDMDSIGDLYEMKPHLAGESVGGETLEASGKLGRPSLQRAQLHVDRISPMIKGGALPQVRNLRYG* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01453 366 SUPERFAMILY Homeodomain-like 30 86 IPR009057 -
Eupl02g01453 366 NCBIfam myb-like DNA-binding domain, SHAQKYF class 31 86 IPR006447 GO:0003677
Eupl02g01453 366 Pfam Myb-like DNA-binding domain 34 82 IPR001005 -
Eupl02g01453 366 Pfam MYB-CC type transfactor, LHEQLE motif 129 175 IPR025756 -
Eupl02g01453 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 88 IPR017930 -
Eupl02g01453 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 238 IPR044848 GO:0003700
Eupl02g01453 366 Gene3D - 30 88 - -
Eupl02g01453 366 FunFam Myb family transcription factor 30 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01453 Eupl-Chr2 32842812 32845261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01453 1 366 G2-like Transcription Factor Family AT1G79430 50.773 1.29e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl02g01453 Myb_DNA-binding 8.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01453 - - pda:103721455 493.426