Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01442 ATGGGTCGTCTCTCTAACGTTAGAAAGGGTTCTTGGACTGAAGAAGAAGATCTCTTACTGAAGAGATGTGTAGAGAAATATGGGGAAGGGAAGTGGAGGCATATCCCTGCAAGGGCAGGGCTGAATCGGTGTCGTAAGAGTTGCAGGTTAAGATGGTTAAACTATCTTCGTCCCAACATCAAGCGAGGTGACTTCTCTGTTGACGAGGTTGATCTTATAATTAGACTCCACAGACTCTTGGGCAACAGATGGTCATTAATAGCAGGGAGAATCCCAGGAAGAACAGCAAACGATATAAAGAACTACTGGAATTCTCGCTTGAGCAAGAAGCTTATCCAGAAAAGCATAGCATGCTTGAAAGAGCACCACCTTAAACCTCACACCAGCTCCGCCATGAATTCAGAGTGGTCATTGTCGAGGGGAATCTCGGAGTCAACCTCCGGTAGCAACCACCTAAGACAAGAAGAAGAAGAATCAGGAGGAGAAGAGGAAGAGAGATTATCTTTTTGGAAGAAACTTTTGTTAGAGGGAGAAGAAATGGAAACAAATTTGAGAGTTGAGAAGAAAGAGATGGTGATTGATGATGGAGATTTGTTTGTGGGGTTTGAAGACTTGATTCAAGATTTGGAAATGTGGGGTGTGTTGGGTGAATAA 654 0.4358 MGRLSNVRKGSWTEEEDLLLKRCVEKYGEGKWRHIPARAGLNRCRKSCRLRWLNYLRPNIKRGDFSVDEVDLIIRLHRLLGNRWSLIAGRIPGRTANDIKNYWNSRLSKKLIQKSIACLKEHHLKPHTSSAMNSEWSLSRGISESTSGSNHLRQEEEESGGEEEERLSFWKKLLLEGEEMETNLRVEKKEMVIDDGDLFVGFEDLIQDLEMWGVLGE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01442 217 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Eupl02g01442 217 SMART sant 8 58 IPR001005 -
Eupl02g01442 217 SMART sant 61 109 IPR001005 -
Eupl02g01442 217 MobiDBLite consensus disorder prediction 141 164 - -
Eupl02g01442 217 Gene3D - 64 164 - -
Eupl02g01442 217 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Eupl02g01442 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Eupl02g01442 217 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Eupl02g01442 217 CDD SANT 11 56 IPR001005 -
Eupl02g01442 217 FunFam Myb transcription factor 9 61 - -
Eupl02g01442 217 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Eupl02g01442 217 CDD SANT 65 107 IPR001005 -
Eupl02g01442 217 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Eupl02g01442 217 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Eupl02g01442 217 Gene3D - 9 61 - -
Eupl02g01442 217 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01442 Eupl-Chr2 32530446 32532954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01442 7 110 MYB Transcription Factor Family AT1G66370 75.000 2.37e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl02g01442 Myb_DNA-binding 1.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01442 - K09422 nnu:104599741 293.123