Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01437 ATGGGGAAGAAGAAGAAGAGGGCTTCGAAGGTTTGGTGTTATTACTGCGATCGAGAGTTCGACGATGAGAAGATATTGGTCCAGCATCAGAAAGCCAGGCACTTCAAATGCCATGTCTGCCACAAGAAACTCTCCACCGCTGGAGGAATGTCTATCCATGTTCTCCAGGTTCACAAGGAGTCCGTCACCAAGGTTCCAAATGCTAAACCTGACAGAGAATCAACCGAAATTGAAATTTTTGGAATGCAAGGAATCCCACCTGAAATTTTAGCGTCTCACTATGGCGAACAAGATGAGGATGCCCCATCAAAGTTGGCCAAAGTGGAGATATCATCTAATTTCGTTGGTGGTGTGCTACCAGGTTCAGTAGGCGTTGGGTTTCCTCCACAATCAACTCTTGGTGCAATGCAGACAATTTACAATTCTGCATTAGCAGTGCCACCTTCAGGTTGGCCAATTCTTGCTCGTCCACAACCTTGGTTTCCACAACATCCAGCAGTTTCACTGCCTCCTGTTGCACCTGTGGGATTGCCACAGCAGCCTTTATTTCCTATACAGAATGCGAAGCCTCCTCTGTCGTCCACACTGTCCCCTGCACTTCAACCATCATTTCAGTTCCCTCCACCTGGGCTGCCCTCATCAACGCCTGTTGTTCCTGTATCTCAACCCTTATTCCCTGTTAGTAGTAATAGTAATACACCTACTCGAAGTTCGCCTTTTTCGGCACCTGCACCTTCAGTGACCATTCCATCAAGCTCTCCAGCAGAACTTAAAAACTCAGTTGAAACGTATTCCAGTGCTACCACTTCTATGGCGAGTAGCTACTATGCTCCGAGCATCCAAGGTTCACATTCATACGCTTCTGGTCCAAATACTGGTGGTCCTTCAATTGGCCCCCCTCCTGTGATCGCTAACAAAGCTCCTGCTACCCAGCCAGCCACTAATGAGGTCTATTTAGTTTGGGACGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCCTTAGTGAAGTATCAGGTGCATGATGAAACTAGCCAGATGAACTCCATTGATGCCGCCATAGACCGAAGGATATCAGAAAGCAGACTGGCAGGTCGTATGGCTTTCTAG 1110 0.4757 MGKKKKRASKVWCYYCDREFDDEKILVQHQKARHFKCHVCHKKLSTAGGMSIHVLQVHKESVTKVPNAKPDRESTEIEIFGMQGIPPEILASHYGEQDEDAPSKLAKVEISSNFVGGVLPGSVGVGFPPQSTLGAMQTIYNSALAVPPSGWPILARPQPWFPQHPAVSLPPVAPVGLPQQPLFPIQNAKPPLSSTLSPALQPSFQFPPPGLPSSTPVVPVSQPLFPVSSNSNTPTRSSPFSAPAPSVTIPSSSPAELKNSVETYSSATTSMASSYYAPSIQGSHSYASGPNTGGPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLVKYQVHDETSQMNSIDAAIDRRISESRLAGRMAF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01437 369 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Eupl02g01437 369 ProSiteProfiles Zinc finger BED-type profile. 6 65 IPR003656 GO:0003677
Eupl02g01437 369 ProSitePatterns Zinc finger C2H2 type domain signature. 13 34 IPR013087 -
Eupl02g01437 369 PANTHER ZINC FINGER PROTEIN 207 1 369 - -
Eupl02g01437 369 CDD SUF4-like 10 91 - -
Eupl02g01437 369 Gene3D Classic Zinc Finger 1 65 - -
Eupl02g01437 369 MobiDBLite consensus disorder prediction 286 309 - -
Eupl02g01437 369 SMART c2h2final6 35 58 IPR013087 -
Eupl02g01437 369 SMART c2h2final6 11 34 IPR013087 -
Eupl02g01437 369 MobiDBLite consensus disorder prediction 228 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01437 Eupl-Chr2 32482732 32495233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01437 1 349 C2H2 Transcription Factor Family AT1G30970 59.944 1.83e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl02g01437 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01437 - - tss:122640980 581.637