Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01429 ATGTTAGGAGCGGTTTTCTTTCCTTCTGCAAATCCACTGAGCTTAAGAAGATCTCTCTTGGGTTCTTCGAATATCACAAACTCGAAATCCTTAAATCTCAGAGCATCGCTTTTCGATTTTCCTCTCGCAAGTAGAATCTTCGTTAGAAATTTGTCGTATTCGACCAGTGAAACCAGCCTGAAAAAGGAATTCTCAAATTTCGGTCAAGTAGTAGAAGTTAAACTTGTGAAAGATGAAAATGGAAAGAGGTCAAAAGGGTATGCATTCATACAATATACTGCTCAAGATGATGCCATGCTAGCCTTAGAAAACATGGATCGCAAGTTCTATGATTATCGCAGTTCATTGATGGGAGGATGGTTTATGTGGAACTGGCGAAGCCTGCGAATAATGCATTTGGAGCATACCCAAGAACCTCAGGGCCCCCTACTGAGCAAAACTCGGAGAACTGAACTGGGTCAAGAAGAGATTGAGCTTGTAGCCGAATTGGATGGTACTTGTGACGCAACAGGTTTGCAGATTAGATCACAGCTTACTTACCCCCGAAAAAAAAGAAGAAAAAAGAAATGA 570 0.4123 MLGAVFFPSANPLSLRRSLLGSSNITNSKSLNLRASLFDFPLASRIFVRNLSYSTSETSLKKEFSNFGQVVEVKLVKDENGKRSKGYAFIQYTAQDDAMLALENMDRKFYDYRSSLMGGWFMWNWRSLRIMHLEHTQEPQGPLLSKTRRTELGQEEIELVAELDGTCDATGLQIRSQLTYPRKKRRKKK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01429 189 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 111 IPR000504 GO:0003723
Eupl02g01429 189 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 43 122 - -
Eupl02g01429 189 SMART rrm1_1 45 117 IPR000504 GO:0003723
Eupl02g01429 189 Gene3D - 35 138 IPR012677 -
Eupl02g01429 189 CDD RRM_SF 46 111 - -
Eupl02g01429 189 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 135 IPR000504 GO:0003723
Eupl02g01429 189 SUPERFAMILY RNA-binding domain, RBD 30 111 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01429 Eupl-Chr2 32271696 32278801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01429 43 113 Eukaryotic Initiation Factors Gene Family AT4G34110 33.803 7.80e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01429 - - nnu:104599704 151.369