Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01406 ATGGAGGATATGGGTATTCGCTCTGCCATCATATTTGTTTCTACGTGCAGGAGCTGTCACCTTCTGAGTTTATTATTGGAAGAGCTTGATCAAACAGCAGTGGCATTGCATTCACACAAGTCCCAGTCTCTGAGGCTTGCTGCACTACATCGATTCAAATCTGGTCAGGTTCCTATTTTGCTGGCAACAGATGTAGCCAGTCGTGGTTTAGACATTCCAACAGTTGATCTTGTTATCAACTATGATATTCCGAGGTATCCACGGGACTACGTTCATCGTGTGGGGCGTACTGCAAGAGCTGGCAGAGGAGGGTTGGCTAATGATGTAGATCTTATTCATGAAATAGAGGCTGTTATTGGAAAACAATTGGACAAGTTTGAATGTAAAGAGAACGAGGTTCTTACTGATATCACAAAGATCTACAAGGCCAAACGTGTTGCAACGATGAAGATGACGGACGATGGCTTTGAAGAGAGAGCAAAAGCACAGAAAACCCAGAAGTTGAAAACATTAGCAGAGAAGGATTATTGA 531 0.4313 MEDMGIRSAIIFVSTCRSCHLLSLLLEELDQTAVALHSHKSQSLRLAALHRFKSGQVPILLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLANDVDLIHEIEAVIGKQLDKFECKENEVLTDITKIYKAKRVATMKMTDDGFEERAKAQKTQKLKTLAEKDY* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01406 176 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 110 IPR027417 -
Eupl02g01406 176 SMART helicmild6 20 101 IPR001650 -
Eupl02g01406 176 Pfam Helicase conserved C-terminal domain 8 101 IPR001650 -
Eupl02g01406 176 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 134 IPR001650 -
Eupl02g01406 176 Gene3D - 2 175 IPR027417 -
Eupl02g01406 176 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 8 166 - -
Eupl02g01406 176 CDD SF2_C_DEAD 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01406 Eupl-Chr2 31783446 31793972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01406 4 126 Eukaryotic Initiation Factors Gene Family AT3G19760 35.659 7.00e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01406 K14778 - msin:131219255 286.574