Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01405 ATGAAGAAACTCACTCCCGTTCAACAACAATGCATTCCTCGAATTCTCTCCGGTAACGATGTTCTGGGGATAGCTCAGACAAGTAGCGGGAAGACGGCTGCCTTTGCATTGCCGATCTTGCATCGCCTCGCCGAAGATCCCTATGGTGTGTTTGTGTTAGTGTTGACGCCGACGAGGGAGCTGGCGTACCAATTGGCGGAGCAGTTTAGGGCACTCGGATCGTGCTTGAACCTCCGCTACGTCGTTGTTGTTGGAGGGATGGATATGATCAACCAGGCGCAAGCACTGATGCAACGCCCACATGTCGTGATTGTGACACCAGGGAGAGTTAAGGTCCTCCTTGATCAAAATCCAGATATCCCTGCAGCGTTCTCCAAGACTAAGTTTCTAGTTTTGGACGAAGCAGATAGGGTTTTGGATGTTGGTTTTGAGGAGGAACTGAGAGTGATATTTCAGTGCTTGCCCAAAGATCGACAGACTCTTTTGTTTTCCGCAACCATGACAAGCAACCTATAG 516 0.4961 MKKLTPVQQQCIPRILSGNDVLGIAQTSSGKTAAFALPILHRLAEDPYGVFVLVLTPTRELAYQLAEQFRALGSCLNLRYVVVVGGMDMINQAQALMQRPHVVIVTPGRVKVLLDQNPDIPAAFSKTKFLVLDEADRVLDVGFEEELRVIFQCLPKDRQTLLFSATMTSNL* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01405 171 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 171 - -
Eupl02g01405 171 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 131 139 IPR000629 -
Eupl02g01405 171 Pfam DEAD/DEAH box helicase 5 170 IPR011545 GO:0003676|GO:0005524
Eupl02g01405 171 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 12 171 IPR014001 -
Eupl02g01405 171 SMART ultradead3 1 171 IPR014001 -
Eupl02g01405 171 Gene3D - 1 171 IPR027417 -
Eupl02g01405 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01405 Eupl-Chr2 31773815 31783304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01405 2 167 Eukaryotic Initiation Factors Gene Family AT1G72730 40.361 6.57e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01405 K14778 - aew:130751956 304.679