Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01374 ATGAGAGCTAAGGTTGATGCTTTCAGCAGCCTCCGCTCTTTGTTCCCTCTCTTTCCCACCCTTTTCTCCTCATCAACTCCCTCCATCCTTAAAACCCTCACCTTGAAAGCTTGCCTTTGCTCCTCCACCTCCACCTCCACCTCTACCACCTCAAATAAAGATAAAAACCTCCAACAACAAGTAGAGAGAGAACCCAAAAACTCTTCTGCCGACGTCTTTCAGAAATGTGGCTGCAGTGATGATGAAATCTCGAAGATCTTCCTCCGCCAGCCTTCCTTGCTCAAAGCCGACCCTACTATTCTTGAGTCCAAGCTGGGTTTACTCCGTGGGTTGGGTCTCACTGGTTCCGATCTCGTCAAGATCATCAACTGCCGGCCCCGCTTGTTGGCCTGTCGCATTGGACGGGGCCTTGACGAGCGCATCAACTTCCTGCAGACCCTTTTTGGGTCCAAGGAAATGCTTCTCAAGGCCATTATCCGGAACCCCTCTCTCCTCAACTACGACTTACAAAATGGTATCAAACCTTGTGTCGCCCTCTACCAAGGAATGGGCATAAGCAAAGAGGAGTTGGTACCTATGCTCATATCGCGGCCCACCTTAGTTCCCCGATCCTCACTCAACCAGGACAAGGTCGATTACATCCGCAGGACGGGCCTCTCCAAGGATTCCAAGATGTACAAGTATGTTGTCTCCCTCATTGCAATCTCCCGCCTCGAGACTATCCGAGAAAAGGTGGCCAACCTAGAGAAGTTTGGGTTCTCAGGTGACGAGGTGATGGGTCTTTTCGGCCGCTCTCCACTAGTGCTCACGCTCTCCATCGACAAGGTCCAAAGGAACATGACCTTCATTATAGGGACCGTGAAGCTCCCCGCTACTGTCATCCTTCGTTACCCATTTCTCTTGTACTATAACTTGGAGACTGTGTTGAAGCCACGATTTCTTCTCGCAAAAAGGATACGGGCAATGGGTCTGCTTCCGCAAATAAAAGGCCCGGCTATGTTGAGGGCATTGAGGATGGCAGAGCCTCGGTTCCTCAAGGCATTTGTTACATGTCACTCCAAGGATGTCACCAAGGAACTGATGGAGTTCTATGAAAAGATTAAGGGCATCAAGCGATTGGCTGAGACTTCAAAGCGGTCTGTGCATAGAGGATTCCCTTTCTGA 1164 0.5026 MRAKVDAFSSLRSLFPLFPTLFSSSTPSILKTLTLKACLCSSTSTSTSTTSNKDKNLQQQVEREPKNSSADVFQKCGCSDDEISKIFLRQPSLLKADPTILESKLGLLRGLGLTGSDLVKIINCRPRLLACRIGRGLDERINFLQTLFGSKEMLLKAIIRNPSLLNYDLQNGIKPCVALYQGMGISKEELVPMLISRPTLVPRSSLNQDKVDYIRRTGLSKDSKMYKYVVSLIAISRLETIREKVANLEKFGFSGDEVMGLFGRSPLVLTLSIDKVQRNMTFIIGTVKLPATVILRYPFLLYYNLETVLKPRFLLAKRIRAMGLLPQIKGPAMLRALRMAEPRFLKAFVTCHSKDVTKELMEFYEKIKGIKRLAETSKRSVHRGFPF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01374 387 Gene3D Transcription termination factor 3, mitochondrial 135 358 IPR038538 -
Eupl02g01374 387 FunFam Mitochondrial transcription termination factor family protein 137 358 - -
Eupl02g01374 387 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 SMART mt_12 223 254 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 MobiDBLite consensus disorder prediction 43 68 - -
Eupl02g01374 387 PANTHER CGI-12 PROTEIN-RELATED 25 352 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 MobiDBLite consensus disorder prediction 43 67 - -
Eupl02g01374 387 Pfam mTERF 130 344 IPR003690 GO:0003690|GO:0006355
Eupl02g01374 387 Pfam mTERF 72 146 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01374 Eupl-Chr2 31138082 31145188 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl02g01374 mTERF 5.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01374 K15031 - nnu:104597637 467.618