Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01363 ATGAGTAATACTCCACTCAAAAGATTCAATGGGCTTATCGTTGGTTTGGCAGTTGGTCAAACTTCAATTGCTGATGAGATCACAGAGCTTATTAGGAGACCTAAGCTCGAGGCAGGCATTTGTTATGATCCAGAGGATCTTTGGGTGGAGTTTGAAAGCTCGGTGGATATTTTGGTGGCAACTCCCGGAAGGCTGATGGACCATGTCAACACTACAAAGGGTTTTTCTCTTGAGCATCTTTGTTATCTTGTAGTTGATGAAACAGACCGGTTACTCCGAGAGGCATATCAGTCCTGGTTGCCTACTGTGCTTCAATTGACTCGCTCAAATGAGGAAGACATGTTTTCCCATGCCAGAACTTTTGCCAACACTATGGTTGGTTCCTTAAAAACCATAAGGAAATCTGGTGTCGAGAGGGGTTTTAAGGGTAATACTTACCCAAGGCTCGTGAAGATGATTCTATCTGCAACTCTGACCCAAGATCCTAGCAAGCTTTCTCAGCTCGATCTACATCACCCTTTGTTCTTGACAACTGGGTCTCAGCGTTATCAGCTACCTGAAAAGCTAGAATCCTACAAACTGATTTGTGAATCAAAGCTTAAACCCCTGTATTTGGTTGCCCTTTTACAAGATTTAAGAGGGGAGAAGTGTATTGTTTTCTCATCATCCGTAGAGTCAACTCATAGGCTCAGCACCTTGTTGAATTCTTTTGATGGGTTGCAATTTAAGATCAAGGAGTATTCGGGTCTTCAACGTCAATCTGTACGAAGCAAAACATTGAGGGCATTTCGGGAAGGGGAAATACAGGTACTTGTTGCTTCAGATGCAATGACTCGTGGGATGGACGTTGAAGGAGTGAAGAATGTCATTAATTACGATATGCCTGCCTATGTTAAGACATTTATTCACCGAGCGGGACGGACTGCAAGGGCAGGGCAGACTGGTCGTTGCTTCACCTTGCTGCGGAGACATGAGGTTAAACGGTTCAAGAACCTTTTACAGAAAGCTGATAATAACTCTTGCAGTGTTCACACTTTACCTGCTGATTCAATTGAATCACTTCGCCCTCTGTACACTTCTGCGTTGCAGAAACTGAGAGAGAGTGTGGAATCAGAAACATTGAGACGACATACGATTAGTTTTAAGTCCTCAAGAGCAATCAAGGGGAAGGAAATCAGGAACACAAAGGAATAG 1194 0.4355 MSNTPLKRFNGLIVGLAVGQTSIADEITELIRRPKLEAGICYDPEDLWVEFESSVDILVATPGRLMDHVNTTKGFSLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSNEEDMFSHARTFANTMVGSLKTIRKSGVERGFKGNTYPRLVKMILSATLTQDPSKLSQLDLHHPLFLTTGSQRYQLPEKLESYKLICESKLKPLYLVALLQDLRGEKCIVFSSSVESTHRLSTLLNSFDGLQFKIKEYSGLQRQSVRSKTLRAFREGEIQVLVASDAMTRGMDVEGVKNVINYDMPAYVKTFIHRAGRTARAGQTGRCFTLLRRHEVKRFKNLLQKADNNSCSVHTLPADSIESLRPLYTSALQKLRESVESETLRRHTISFKSSRAIKGKEIRNTKE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01363 397 Gene3D - 4 185 IPR027417 -
Eupl02g01363 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 334 IPR027417 -
Eupl02g01363 397 Pfam Helicase conserved C-terminal domain 201 312 IPR001650 -
Eupl02g01363 397 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 176 IPR014001 -
Eupl02g01363 397 SMART helicmild6 228 312 IPR001650 -
Eupl02g01363 397 CDD SF2_C_DEAD 189 321 - -
Eupl02g01363 397 Gene3D - 188 352 IPR027417 -
Eupl02g01363 397 Pfam DEAD/DEAH box helicase 46 165 IPR011545 GO:0003676|GO:0005524
Eupl02g01363 397 PANTHER RNA HELICASE 11 358 - -
Eupl02g01363 397 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 204 351 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01363 Eupl-Chr2 30856722 30867186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01363 57 321 Eukaryotic Initiation Factors Gene Family AT5G11200 26.667 4.73e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01363 K14807 - ming:122093922 617.076