Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01338 ATGGCAAATTCGACTGAACCATCATCTTCCTTGAGCTTTACCTCATCTTCCCATCTATCAAATGGTTCAAGTAGCTACAACAAATCTTCCTCCACCAGCTCTGAAACAGGGGCGAATCTTGAAATCATCAGTTTAAGCAAGCTTAGCTGTAATCTGGAACAATTGTTGGCTGATTCCGGATTTGACTATAGCGATGCAGAGATTATTGTTGAGGGCATCCCGGTGGGTGTTCACCGATGTATTTTGGCTGCACGGAGCAAGTTTTTTCATGAGCTTTTCACACAGGGGAATGGAATTTCTCAGAAGGAAGGTAAACCAAAGTATTGCATGAGTGATTTGGTGCCTTATGGTAGGGTTGGATACGAAGCCTTCAAGATTTTCTTGAGTTATTTGTATACCGGAAAGCTAAAGCCATCTCCGCCGGAGGTATCGACATGTGTTGATAAACTCTGTGCCCACGATGCATGCCGACCTGCTATTAATTTTGTGGTGGAATTGATGTATGCTTCTGCCATTTTTCAGATAACAGAGCTGGTATCACTTTTCCAGCGCCGTCTTCTAAACTTTGTCGAGAAGGCTCTTGTGGAAGATGTAATCCCAATCCTACTGGTTGCCTTCCATTGCCAAGTGAATCAGCTCGTTGATCACTGTGTCCAGAGAGTAGCACGGTCAGACCTTGACAGCATCTCTCTAGAGAAGGAGCTACCTCATGAAGTTGCAGAAAACATCAGATTGCTCCGCCTCAAATCTCGGCCTGATGATGAACCCAATGCAATGATCGTGGACTGTGTTCATGAAAAGAGAATCAGGAGAATCCATAAGGCATTGGACTCCGATGATGTCGAACTGGTGAAACTCCTCCTTACTGAATCCGATGTCACCTTAGATGATGCCTGTGCTCTTCATTATGTTGCTGCTTACTGTGATCCCAAGGTTTTGGCTGAGGTACTCGAGCTGAAGTTGGCTGATGTCAACCTTAGGAATGCCCGAGGTTACACAGTGCTCCACGTGGCTGCAATGCGTAAGGAGCCATCAGTGATTGTGTCACTTCTGAACAAAGGGGCTTGTGCATCTGAAACTACGTTTGATGGACAGAATGCCGTCACTATCTGCCGGAGGTTGACAAGGCCAAAGGATTATGACACAAAGACGAAGCAGGGGCAGGAATCGAACAAAGACCGGCTATGCATTGACGTTTTGGAAAGAGAGATACGGAGGAATCCCATGGCTGGAGACACGTTGATCTCATCGTCAGCGATGGCTGACGATCTGCACATGAAGCTGCTATACTTGGAAAACAGAGTGGCATTTGCAAGACTGTTCTTCCCCATTGAGGCCAAGCTAGCAATGCAGATCGCGCAAACAGAGACAACATCTGAGTTTTCTGGTCTTTCTTCATCAAAAAAATTGTACGCGAACCTGAAGGAGGTTGATTTGAATGAGACGCCCACAATGCAAAACAAAAGACTTCGTTCAAGGATGGATGCCCTGCAAAAAACAGTGGGGATGGGTCGACGCTTCTTCCCCCATTGCTCAGAAGAGCTGGATAAGTTTATGGAAGACATCATGGAAGATGATTTGCCTGACTTGTTCTACCTTGAGAAGGGCACTGCCGATGAGCAGAGAATCAAAAGGATGCGTTTCATGGAGCTTAAAGATGACATTCAGAAGGCATTTAACAAGGACAAGGCCGAGTTCAGCCGATCGGGGTTGTCGTCATCATCGTCATCCTCATCTTCTCTAAAGGACGGAATAAATTACAAAGTCACAAAGAAGTGA 1779 0.4581 MANSTEPSSSLSFTSSSHLSNGSSSYNKSSSTSSETGANLEIISLSKLSCNLEQLLADSGFDYSDAEIIVEGIPVGVHRCILAARSKFFHELFTQGNGISQKEGKPKYCMSDLVPYGRVGYEAFKIFLSYLYTGKLKPSPPEVSTCVDKLCAHDACRPAINFVVELMYASAIFQITELVSLFQRRLLNFVEKALVEDVIPILLVAFHCQVNQLVDHCVQRVARSDLDSISLEKELPHEVAENIRLLRLKSRPDDEPNAMIVDCVHEKRIRRIHKALDSDDVELVKLLLTESDVTLDDACALHYVAAYCDPKVLAEVLELKLADVNLRNARGYTVLHVAAMRKEPSVIVSLLNKGACASETTFDGQNAVTICRRLTRPKDYDTKTKQGQESNKDRLCIDVLEREIRRNPMAGDTLISSSAMADDLHMKLLYLENRVAFARLFFPIEAKLAMQIAQTETTSEFSGLSSSKKLYANLKEVDLNETPTMQNKRLRSRMDALQKTVGMGRRFFPHCSEELDKFMEDIMEDDLPDLFYLEKGTADEQRIKRMRFMELKDDIQKAFNKDKAEFSRSGLSSSSSSSSSLKDGINYKVTKK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01338 592 Pfam Domain of unknown function (DUF3420) 225 273 IPR024228 -
Eupl02g01338 592 FunFam regulatory protein NPR3-like 264 404 - -
Eupl02g01338 592 Gene3D - 263 404 IPR036770 -
Eupl02g01338 592 PANTHER REGULATORY PROTEIN NPR3 11 585 IPR044292 GO:0009862|GO:2000022|GO:2000031
Eupl02g01338 592 SMART BTB_4 64 190 IPR000210 GO:0005515
Eupl02g01338 592 MobiDBLite consensus disorder prediction 1 34 - -
Eupl02g01338 592 ProSiteProfiles Ankyrin repeat profile. 330 355 IPR002110 GO:0005515
Eupl02g01338 592 SUPERFAMILY Ankyrin repeat 268 374 IPR036770 -
Eupl02g01338 592 Gene3D Potassium Channel Kv1.1; Chain A 31 222 IPR011333 -
Eupl02g01338 592 Pfam BTB/POZ domain 58 144 IPR000210 GO:0005515
Eupl02g01338 592 SMART ANK_2a 330 359 IPR002110 GO:0005515
Eupl02g01338 592 SMART ANK_2a 296 326 IPR002110 GO:0005515
Eupl02g01338 592 SMART ANK_2a 267 295 IPR002110 GO:0005515
Eupl02g01338 592 SUPERFAMILY POZ domain 62 188 IPR011333 -
Eupl02g01338 592 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Eupl02g01338 592 MobiDBLite consensus disorder prediction 566 585 - -
Eupl02g01338 592 CDD BTB_POZ_NPR_plant 47 190 - -
Eupl02g01338 592 ProSiteProfiles Ankyrin repeat region circular profile. 330 355 - -
Eupl02g01338 592 MobiDBLite consensus disorder prediction 563 592 - -
Eupl02g01338 592 Pfam Ankyrin repeat 331 356 IPR002110 GO:0005515
Eupl02g01338 592 Pfam NPR1/NIM1 like defence protein C terminal 372 578 IPR021094 -
Eupl02g01338 592 FunFam Regulatory protein NPR3 38 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01338 Eupl-Chr2 30310372 30317947 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl02g01338 NPR1_like_C 3.4e-91 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01338 K14508 - vvi:100247744 839.336