Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01325 ATGAAAGACACCGGTAGGAAACAAGGAGCAGCATCACCATGTGCAGCGTGCAAGCTTCTTCGGAGGCGGTGTGCACAGGATTGTGTGTTTGCTCCTTATTTTCCTGCCGATGAACCCCAGAAGTTTGCTAACGTGCACAAGGTCTTTGGTGCCAGCAATGTCAACAAGATGTTACAGGATTTGCCGGAGCATCAACGAGGCGATGCCGTCAGTAGCATGGTGTACGAAGCGAACGCAAGGGTACGAGACCCGGTTTATGGATGTGTGGGTGCCATATCATCTCTACAACAACAAATTGATAATCTTCAGACCCAATTGGCACTAACACAAGCTGAGGTGGTTCAAATGAAAATGCGTCACACGGCGTCGACGTCGACGTCGGATATCGCATTTAACTCGAACCTTAGTGCCTTAACCTCCTCCAAGCTGAAAACCCCACATACTAAGTCCTTGTTTAACATAGATATGATGATGATAGACCAGGCCAGCATGGGTGGGTCCTTGTGGTCCTACTAG 516 0.4884 MKDTGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDNLQTQLALTQAEVVQMKMRHTASTSTSDIAFNSNLSALTSSKLKTPHTKSLFNIDMMMIDQASMGGSLWSY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01325 171 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Eupl02g01325 171 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Eupl02g01325 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 134 - -
Eupl02g01325 171 Coils Coil 92 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01325 Eupl-Chr2 29939689 29942154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01325 1 170 AS2 family AT1G31320 69.767 1.25e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl02g01325 LOB 2.9e-44 No_clan