Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g01315 ATGGTTTCCAATTCTGATTTCGACTCCGATTACATTTTCCGTCCGGATTTCCGTGAAATCTTGCCTTCCATCACCGCAGAAAACGTCGCCATCCCAATGTGGAACTATGAAAGTTTTCCCTTAGTTGGAAACGGAGCCAACGATATATTGCTGTCGGATAATGACACCGTGTTGTCAGTTTCCGGGATGTCATTCCCCGAACGACTCGGGATTCCGGCGATGGAGATGTCGGCTCCCGCATTATCGGAATGTGAGATGGGTTTATGCAGCATTGCCGGAATTCAGAGTATCGGAGCTGAATTCCAGCCAGAAGCCTATGATTTTACTGAGAAATGCAATCGCTTTGCGTCAGATTTCCAGCCTCTATACGGTGGCCAAGACGTTTGGGCAGTTCAAGGTAGCACATTACCAAGAATTGAAGAACCAGCTGGTATGAAAGTTGGTCGTTACTCAGTAGAAGAAAGGAAGGATAGAATCCTCAAATACTTGAAGAAGAGAAATCAAAGGAACTTCAATAAAACTATCAAGTACGCCTGTCGAAAAACCCTAGCCGATAGGCGGATTCGAGTTCGTGGGAGATTTGCAAGGAACAATGACTTAGGCGAAGAATCCATGATAGAGAAAAACAACAACAATCGTCGAGAGGAGGAAGAATACTATGATGATGGTGCCCAGATCAAATTCAATGGGGAGGAATGGTTACAAGAGGCAGTGACAAGTCTCATGTACCTACCTATTTTTGCTGGATGA 750 0.4493 MVSNSDFDSDYIFRPDFREILPSITAENVAIPMWNYESFPLVGNGANDILLSDNDTVLSVSGMSFPERLGIPAMEMSAPALSECEMGLCSIAGIQSIGAEFQPEAYDFTEKCNRFASDFQPLYGGQDVWAVQGSTLPRIEEPAGMKVGRYSVEERKDRILKYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNDLGEESMIEKNNNNRREEEEYYDDGAQIKFNGEEWLQEAVTSLMYLPIFAG* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g01315 249 ProSiteProfiles CCT domain profile. 155 197 IPR010402 GO:0005515
Eupl02g01315 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 116 209 IPR045281 GO:0009909
Eupl02g01315 249 Pfam CCT motif 155 197 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g01315 Eupl-Chr2 29594606 29596310 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g01315 142 204 C2C2-CO-like Transcription Factor Family AT5G15850 44.444 1.83e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl02g01315 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g01315 - - nnu:104609465 302.753